Candidatus Pelagibacter sp.

Gram-negativeBacilli

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Candidatus Pelagibacterales

Family

Candidatus Pelagibacteraceae

Genus

Candidatus Pelagibacter

Description

Candidatus Pelagibacter sp. is a Gram-negative bacterium characterized by its bacilli shape. It is notable for having a single replicon, which is a feature of its genetic organization. The organism is part of a group that plays a significant role in marine ecosystems, contributing to the cycling of carbon and other nutrients in oceanic waters. The classification and identification of Candidatus Pelagibacter sp. are supported by its accession number NZES00000000.1, which provides a reference for its genomic sequence and associated data. This bacterium is part of a larger clade of microorganisms known for their small cell size and streamlined genomes, adaptations that enable them to thrive in nutrient-poor marine environments. The ecological significance of Candidatus Pelagibacter sp. lies in its contribution to the microbial communities in oceans, where it participates in the degradation of organic matter and supports primary production. Its presence is indicative of the health of marine ecosystems and highlights the importance of microbial life in maintaining ecological balance. Understanding the traits and roles of such microorganisms can provide insights into broader environmental processes and the impacts of human activities on marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCandidatus Pelagibacterales
FamilyCandidatus Pelagibacteraceae
GenusCandidatus Pelagibacter
SpeciesCandidatus Pelagibacter sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Pelagibacter sp.


Gene Summary

Adenine Count

446332 bp

Thymine Count

445105 bp

Guanine Count

203619 bp

Cytosine Count

200782 bp

Genome Length

1300718 bp

Protein-coding Genes

1295 genes

Non-Coding Genes

28 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
citramalate synthaseCMI68_00200Not AvailablePositive39435 - 4103658332.5
hypothetical proteinCMI68_00205Not AvailablePositive41036 - 4176127555.8
30s ribosomal protein s4CMI68_00210Not AvailablePositive41807 - 4242423934.0
hypothetical proteinCMI68_00215Not AvailablePositive42433 - 4304724349.2
monothiol glutaredoxin, grx4 familyCMI68_00220Not AvailableNegative43060 - 4339812521.1
bola family transcriptional regulatorCMI68_00225Not AvailableNegative43402 - 436328239.01
adenylosuccinate lyaseCMI68_00230Not AvailableNegative43648 - 4495549108.4
type i methionyl aminopeptidaseCMI68_00235Not AvailableNegative44952 - 4572828229.6
dna/rna nuclease sfsaCMI68_00240Not AvailableNegative45731 - 4642326648.7
competence/damage-inducible protein aCMI68_00245Not AvailablePositive46446 - 4720127801.8

Displaying genes 41 – 50 of 1323 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.