Candidatus Pelagibacter sp.

Gram-negativeBacilli

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Candidatus Pelagibacterales

Family

Candidatus Pelagibacteraceae

Genus

Candidatus Pelagibacter

Description

Candidatus Pelagibacter sp. is a Gram-negative bacterium characterized by its bacilli shape. It is notable for having a single replicon, which is a feature of its genetic organization. The organism is part of a group that plays a significant role in marine ecosystems, contributing to the cycling of carbon and other nutrients in oceanic waters. The classification and identification of Candidatus Pelagibacter sp. are supported by its accession number NZES00000000.1, which provides a reference for its genomic sequence and associated data. This bacterium is part of a larger clade of microorganisms known for their small cell size and streamlined genomes, adaptations that enable them to thrive in nutrient-poor marine environments. The ecological significance of Candidatus Pelagibacter sp. lies in its contribution to the microbial communities in oceans, where it participates in the degradation of organic matter and supports primary production. Its presence is indicative of the health of marine ecosystems and highlights the importance of microbial life in maintaining ecological balance. Understanding the traits and roles of such microorganisms can provide insights into broader environmental processes and the impacts of human activities on marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCandidatus Pelagibacterales
FamilyCandidatus Pelagibacteraceae
GenusCandidatus Pelagibacter
SpeciesCandidatus Pelagibacter sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Pelagibacter sp.


Gene Summary

Adenine Count

446332 bp

Thymine Count

445105 bp

Guanine Count

203619 bp

Cytosine Count

200782 bp

Genome Length

1300718 bp

Protein-coding Genes

1295 genes

Non-Coding Genes

28 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gyd domain-containing proteinCMI68_00150Not AvailablePositive29553 - 2987611290.5
2-methylcitrate synthaseCMI68_00155Not AvailableNegative29879 - 3101843153.0
methylisocitrate lyaseCMI68_00160Not AvailableNegative31121 - 3201733973.0
lysine transporter lyseCMI68_00165Not AvailableNegative32029 - 3262822331.1
had family hydrolaseCMI68_00170Not AvailableNegative32615 - 3331026249.7
udp-n-acetylglucosamine pyrophosphorylaseCMI68_00175Not AvailablePositive33383 - 3402123097.3
glutamine--fructose-6-phosphate transaminase (isomerizing)CMI68_00180Not AvailablePositive34021 - 3583867155.5
3-deoxy-7-phosphoheptulonate synthase class iiCMI68_00185Not AvailablePositive35914 - 3729351453.7
nad(+) synthaseCMI68_00190Not AvailablePositive37347 - 3808727507.1
cysteine--trna ligaseCMI68_00195Not AvailablePositive38080 - 3943849913.4

Displaying genes 31 – 40 of 1323 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.