Nitrospina sp.

Kingdom

Pseudomonadati

Phylum

Nitrospinota

Class

Nitrospinia

Order

Nitrospinales

Family

Nitrospinaceae

Genus

Nitrospina

Description

Nitrospina sp. is characterized by its possession of two replicons, which is notable for its genetic structure. The organism is represented in genetic databases under the accession numbers DPVJ00000000.1 and PAJA00000000.1. These replicons are crucial for understanding its genomic organization and potential functions within its ecological niche. Nitrospina sp. is a member of the Nitrospina genus, which is recognized for its role in the nitrogen cycle, specifically in the process of nitrification. This microorganism is involved in the oxidation of nitrite to nitrate, contributing to the transformation and availability of nitrogen in various environments. Understanding its genetic makeup, as indicated by its replicons, could provide insights into its metabolic pathways and ecological contributions. The presence of two replicons may suggest a level of genetic adaptability, which could be beneficial for survival in diverse and fluctuating environmental conditions. This adaptability can enhance its efficiency in nitrogen cycling, impacting nutrient availability in marine and soil ecosystems. Hence, the study of Nitrospina sp. not only contributes to our knowledge of microbial processes but also highlights its ecological significance in maintaining nitrogen balance within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumNitrospinota
ClassNitrospinia
OrderNitrospinales
FamilyNitrospinaceae
GenusNitrospina
SpeciesNitrospina sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Nitrospina sp. isolate UBA9663 contig_74846, whole

Gene Summary

Adenine Count

548842 bp

Thymine Count

552351 bp

Guanine Count

483435 bp

Cytosine Count

476999 bp

Genome Length

2164997 bp

Protein-coding Genes

2290 genes

Non-Coding Genes

19 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
squalene--hopene cyclaseDHW17_01700Not AvailablePositive317514 - 31948474898.9
hypothetical proteinDHW17_01705Not AvailableNegative319589 - 32016121791.3
hypothetical proteinDHW17_01710Not AvailableNegative320231 - 32051510917.5
hypothetical proteinDHW17_01715Not AvailablePositive320510 - 32135231680.8
endopeptidase laDHW17_01720Not AvailableNegative321760 - 32416589698.0
atp-dependent clp protease atp-binding subunit clpxDHW17_01725Not AvailableNegative324169 - 32541646425.1
atp-dependent clp endopeptidase proteolytic subunit clppDHW17_01730Not AvailableNegative325461 - 32609623454.1
trigger factorDHW17_01735Not AvailableNegative326222 - 32734042127.1
dna-directed rna polymerase subunit alphaDHW17_01740Not AvailableNegative327343 - 32822032688.3
30s ribosomal protein s4DHW17_01745Not AvailableNegative328290 - 32891623648.9

Displaying genes 341 – 350 of 4049 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.