Nitrospina sp.

Kingdom

Pseudomonadati

Phylum

Nitrospinota

Class

Nitrospinia

Order

Nitrospinales

Family

Nitrospinaceae

Genus

Nitrospina

Description

Nitrospina sp. is characterized by its possession of two replicons, which is notable for its genetic structure. The organism is represented in genetic databases under the accession numbers DPVJ00000000.1 and PAJA00000000.1. These replicons are crucial for understanding its genomic organization and potential functions within its ecological niche. Nitrospina sp. is a member of the Nitrospina genus, which is recognized for its role in the nitrogen cycle, specifically in the process of nitrification. This microorganism is involved in the oxidation of nitrite to nitrate, contributing to the transformation and availability of nitrogen in various environments. Understanding its genetic makeup, as indicated by its replicons, could provide insights into its metabolic pathways and ecological contributions. The presence of two replicons may suggest a level of genetic adaptability, which could be beneficial for survival in diverse and fluctuating environmental conditions. This adaptability can enhance its efficiency in nitrogen cycling, impacting nutrient availability in marine and soil ecosystems. Hence, the study of Nitrospina sp. not only contributes to our knowledge of microbial processes but also highlights its ecological significance in maintaining nitrogen balance within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumNitrospinota
ClassNitrospinia
OrderNitrospinales
FamilyNitrospinaceae
GenusNitrospina
SpeciesNitrospina sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Nitrospina sp. isolate UBA9663 contig_74846, whole

Gene Summary

Adenine Count

548842 bp

Thymine Count

552351 bp

Guanine Count

483435 bp

Cytosine Count

476999 bp

Genome Length

2164997 bp

Protein-coding Genes

2290 genes

Non-Coding Genes

19 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tyrosine--trna ligaseCMH73_05780Not AvailablePositive1160049 - 116124844668.2
50s ribosomal protein l34CMH73_05785Not AvailablePositive1161687 - 11618215277.65
ribonuclease p protein componentCMH73_05790Not AvailablePositive1161968 - 116231213217.7
membrane protein insertion efficiency factor yiddCMH73_05795Not AvailablePositive1162359 - 11625718029.97
hypothetical proteinCMH73_05800Not AvailablePositive1162602 - 116422760919.8
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmeCMH73_05805Not AvailablePositive1164391 - 116576450418.5
alcohol dehydrogenaseCMH73_05810Not AvailablePositive1165891 - 116689836403.9
b12-binding domain-containing radical sam proteinCMH73_05815Not AvailableNegative1167071 - 116888270062.5
radical sam proteinCMH73_05820Not AvailableNegative1168991 - 117083269844.8
hypothetical proteinCMH73_05825Not AvailablePositive1171087 - 117326177323.8

Displaying genes 3461 – 3470 of 4049 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.