Nitrospina sp.

Kingdom

Pseudomonadati

Phylum

Nitrospinota

Class

Nitrospinia

Order

Nitrospinales

Family

Nitrospinaceae

Genus

Nitrospina

Description

Nitrospina sp. is characterized by its possession of two replicons, which is notable for its genetic structure. The organism is represented in genetic databases under the accession numbers DPVJ00000000.1 and PAJA00000000.1. These replicons are crucial for understanding its genomic organization and potential functions within its ecological niche. Nitrospina sp. is a member of the Nitrospina genus, which is recognized for its role in the nitrogen cycle, specifically in the process of nitrification. This microorganism is involved in the oxidation of nitrite to nitrate, contributing to the transformation and availability of nitrogen in various environments. Understanding its genetic makeup, as indicated by its replicons, could provide insights into its metabolic pathways and ecological contributions. The presence of two replicons may suggest a level of genetic adaptability, which could be beneficial for survival in diverse and fluctuating environmental conditions. This adaptability can enhance its efficiency in nitrogen cycling, impacting nutrient availability in marine and soil ecosystems. Hence, the study of Nitrospina sp. not only contributes to our knowledge of microbial processes but also highlights its ecological significance in maintaining nitrogen balance within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumNitrospinota
ClassNitrospinia
OrderNitrospinales
FamilyNitrospinaceae
GenusNitrospina
SpeciesNitrospina sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Nitrospina sp. isolate UBA9663 contig_74846, whole

Gene Summary

Adenine Count

548842 bp

Thymine Count

552351 bp

Guanine Count

483435 bp

Cytosine Count

476999 bp

Genome Length

2164997 bp

Protein-coding Genes

2290 genes

Non-Coding Genes

19 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDHW17_11115Not AvailableNegative2057841 - 205890239456.5
hypothetical proteinDHW17_11120Not AvailableNegative2059063 - 20592607641.18
50s ribosomal protein l34DHW17_11125Not AvailablePositive2059243 - 20593775291.68
ribonuclease p protein componentDHW17_11130Not AvailablePositive2059613 - 205995712998.3
membrane protein insertion efficiency factor yiddDHW17_11135Not AvailablePositive2060010 - 20602228166.07
hypothetical proteinDHW17_11140Not AvailablePositive2060251 - 206190061612.1
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmeDHW17_11145Not AvailablePositive2062136 - 206253514243.3
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmeDHW17_11150Not AvailablePositive2062839 - 20631019580.11
hypothetical proteinDHW17_11155Not AvailablePositive2063429 - 206415426710.4
b12-binding domain-containing radical sam proteinDHW17_11160Not AvailableNegative2064476 - 206518327519.3

Displaying genes 2201 – 2210 of 4049 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.