Cycloclasticus sp.

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Cycloclasticus

Description

Cycloclasticus sp. is characterized by having a single replicon, which plays a crucial role in its genetic organization and replication processes. This marine bacterium is known to engage in symbiotic relationships, specifically with the deep-sea bivalve Bathymodiolus heckerae. Such symbiosis suggests that Cycloclasticus sp. may contribute to the nutritional needs of its host, likely through the degradation of organic matter or the utilization of specific substrates available in the deep-sea environment. The accession number PBBD00000000.1 indicates that the genomic sequence of Cycloclasticus sp. has been documented, providing a basis for further research into its metabolic capabilities and interactions with its host. The unique ecological niche that Cycloclasticus sp. occupies, alongside Bathymodiolus heckerae, emphasizes the importance of microbial life in sustaining deep-sea ecosystems, particularly in environments where sunlight is absent and organic matter is limited. Understanding the role of Cycloclasticus sp. as a symbiont may shed light on the complex interactions within deep-sea communities and the evolutionary adaptations that allow organisms to thrive in extreme environments. The relationship between Cycloclasticus sp. and Bathymodiolus heckerae exemplifies the intricate dependencies that can exist between microorganisms and their hosts, illustrating the significance of microbial symbionts in marine biodiversity and ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusCycloclasticus
SpeciesCycloclasticus sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipsymbiont
Host(s)Bathymodiolus heckerae
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Cycloclasticus sp. isolate SP43 MHASMcontig_182771, whole

Gene Summary

Adenine Count

674042 bp

Thymine Count

671675 bp

Guanine Count

499124 bp

Cytosine Count

506063 bp

Genome Length

2350912 bp

Protein-coding Genes

2239 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
card family transcriptional regulatorCL866_03390Not AvailableNegative694493 - 69520926578.3
rieske (2fe-2s) proteinCL866_03395Not AvailableNegative695344 - 69659747445.6
anthranilate 1,2-dioxygenaseCL866_03400Not AvailableNegative696616 - 69710118583.0
hypothetical proteinCL866_03405Not AvailableNegative697239 - 69761013432.3
4-hydroxythreonine-4-phosphate dehydrogenaseCL866_03410Not AvailablePositive698092 - 69906634633.8
rieske (2fe-2s) proteinCL866_03415Not AvailablePositive699090 - 70033747223.6
naphthalene 1,2-dioxygenaseCL866_03420Not AvailablePositive700367 - 70174351536.3
aromatic-ring-hydroxylating dioxygenase subunit betaCL866_03425Not AvailablePositive701748 - 70228120936.9
biphenyl-2,3-diol 1,2-dioxygenaseCL866_03430Not AvailablePositive702326 - 70322234235.4
hypothetical proteinCL866_03435Not AvailableNegative703295 - 70369915507.6

Displaying genes 671 – 680 of 2290 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.