Psychrobacter sp. JB193

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter sp. JB193 is a psychrophilic bacterium, which means it thrives in cold environments. One notable trait of this organism is the presence of flagella, which suggests that it has the capability for motility. This motility may be advantageous for the bacterium in its natural cold habitats, allowing it to navigate through liquid environments or sediments where it may find nutrients or evade unfavorable conditions. The strain has a single replicon, indicating a relatively simple genomic structure, which can be associated with certain ecological adaptations. Such simplicity may facilitate quicker responses to environmental changes, a beneficial trait for microbes living in fluctuating cold ecosystems. The genomic information for Psychrobacter sp. JB193 is cataloged under the accession number NRGY00000000.1. This genomic data can provide insights into the metabolic pathways and potential biotechnological applications of this strain, particularly in cold environments. Overall, Psychrobacter sp. JB193 exemplifies the adaptations of microorganisms to extreme conditions, specifically in cold habitats. Its motility and genomic structure may play roles in its ecological niche, contributing to nutrient cycling and the overall dynamics of microbial communities in cold ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter sp. JB193
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter sp. JB193 SAMN07141171.110, whole genome shotgun

Gene Summary

Adenine Count

988410 bp

Thymine Count

994010 bp

Guanine Count

746080 bp

Cytosine Count

748098 bp

Genome Length

3476598 bp

Protein-coding Genes

2798 genes

Non-Coding Genes

217 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-oxoadipyl-coa thiolaseCIK80_13370Not AvailableNegative3061595 - 306283643898.6
3-oxoadipate coa-transferaseCIK80_13375Not AvailableNegative3062875 - 306354323385.9
3-oxoadipate coa-transferaseCIK80_13380Not AvailableNegative3063570 - 306426224627.9
benzoate transporterCIK80_13385Not AvailableNegative3064405 - 306559842222.8
1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenaseCIK80_13390Not AvailableNegative3065671 - 306645627729.0
nadh oxidaseCIK80_13395Not AvailableNegative3066498 - 306751437463.0
benzoate 1,2-dioxygenase small subunitCIK80_13400Not AvailableNegative3067620 - 306811720105.5
benzoate 1,2-dioxygenase large subunitCIK80_13405Not AvailableNegative3068182 - 306955552507.5
catechol 1,2-dioxygenaseCIK80_13410Not AvailableNegative3069734 - 307065734101.3
muconolactone delta-isomeraseCIK80_13415Not AvailableNegative3070891 - 307118111375.7

Displaying genes 2661 – 2670 of 3015 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.