Labrenzia sp. VG12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Labrenzia

Description

Labrenzia sp. VG12 is characterized by having a single replicon, indicating a streamlined genomic organization. This microbial strain is classified under the genus Labrenzia, which is known for its distinct characteristics within the family of marine bacteria. The specific accession number for Labrenzia sp. VG12 is NZ_CP022529.1, which provides a reference for genomic data related to this strain. The simplicity of having one replicon could suggest an efficient replication process, potentially contributing to the adaptability of Labrenzia sp. VG12 in its ecological niche. While specific ecological roles or interactions are not detailed in the provided data, the genus Labrenzia is typically associated with marine environments, suggesting that this strain may play a role in nutrient cycling or as part of the microbial community in such habitats. Understanding the genomic and phenotypic traits of Labrenzia sp. VG12 could offer insights into its potential applications in biotechnology or ecology, particularly in marine contexts. The single replicon trait may also imply a reduced metabolic burden, which could enhance its survival and proliferation in challenging environmental conditions. Further exploration of this strain could reveal its significance in marine microbiology and contribute to our understanding of microbial diversity in ocean ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusLabrenzia
SpeciesLabrenzia sp. VG12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Labrenzia sp. VG12 chromosome, complete genome.

Gene Summary

Adenine Count

1203462 bp

Thymine Count

1194139 bp

Guanine Count

1780799 bp

Cytosine Count

1799148 bp

Genome Length

5977548 bp

Protein-coding Genes

5443 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii 3-dehydroquinate dehydrataseCHH27_RS27110Not AvailablePositive5879209 - 587965216129.2
sugar transferaseCHH27_RS27115Not AvailableNegative5879716 - 588040525793.6
udp-glucose dehydrogenase family proteinCHH27_RS27120Not AvailableNegative5880725 - 588203246999.2
eal domain-containing proteinCHH27_RS27125Not AvailablePositive5882363 - 588451077122.9
urea abc transporter atp-binding subunit urteCHH27_RS27130Not AvailableNegative5884518 - 588521325311.8
urea abc transporter atp-binding protein urtdCHH27_RS27135Not AvailableNegative5885387 - 588613327017.4
urea abc transporter permease subunit urtcCHH27_RS27140Not AvailableNegative5886139 - 588738644745.1
urea abc transporter permease subunit urtbCHH27_RS27145Not AvailableNegative5887383 - 588900557632.9
urea abc transporter substrate-binding proteinCHH27_RS27150Not AvailableNegative5889248 - 589053446257.5
atp-binding proteinCHH27_RS27155Not AvailablePositive5890882 - 5894271123003.0

Displaying genes 5441 – 5450 of 5517 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.