Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. B4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1401375 bp
Thymine Count
1403305 bp
Guanine Count
2776349 bp
Cytosine Count
2764437 bp
Genome Length
8345466 bp
Protein-coding Genes
7991 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| terephthalate 1,2-dioxygenase, terminal oxygenase component subunit beta 1 | CHC07_07996 | Not Available | Negative | 8183952 - 8184428 | 17791.2 |
| terephthalate 1,2-dioxygenase, terminal oxygenase component subunit alpha 1 | CHC07_07997 | Not Available | Negative | 8184430 - 8185674 | 46160.5 |
| terephthalate 1,2-dioxygenase, reductase component 2 | CHC07_07998 | Not Available | Negative | 8185690 - 8186679 | 35746.6 |
| pectin degradation repressor protein kdgr | CHC07_07999 | Not Available | Positive | 8186858 - 8187763 | 32452.0 |
| hypothetical protein | CHC07_08000 | Not Available | Positive | 8187787 - 8188779 | 35138.4 |
| hth-type transcriptional regulator lutr | CHC07_08001 | Not Available | Positive | 8189535 - 8190293 | 27898.3 |
| hypothetical protein | CHC07_08002 | Not Available | Positive | 8190414 - 8190713 | 10467.5 |
| hypothetical protein | CHC07_08003 | Not Available | Negative | 8191333 - 8192184 | 29851.5 |
| hypothetical protein | CHC07_08004 | Not Available | Negative | 8192181 - 8192567 | 13515.4 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | CHC07_08005 | Not Available | Negative | 8192647 - 8193327 | 23440.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
