Variovorax sp. B4

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. B4 is a rod-shaped bacterium characterized by a single replicon, indicating a streamlined genomic structure. The genome of Variovorax sp. B4 is accessible under the accession number NNBQ00000000.1, which provides essential information for researchers interested in its genetic makeup and potential applications. The rod shape of Variovorax sp. B4 suggests a specific adaptation to its environment, which may enhance its motility and nutrient uptake. This morphological characteristic is often associated with various ecological roles, including decomposition and bioremediation. Rod-shaped bacteria are typically efficient in colonizing surfaces and can thrive in diverse habitats, indicating that Variovorax sp. B4 may play a significant role in its ecosystem. In terms of ecological insight, the presence of Variovorax sp. B4 within a microbial community could suggest its involvement in nutrient cycling, particularly in environments impacted by organic waste. Its capacity to adapt to varying conditions might facilitate interactions with other microorganisms, contributing to overall microbial diversity and resilience. Understanding the specific functions of Variovorax sp. B4 in its habitat could provide valuable information for applications in environmental microbiology and biotechnology, particularly in efforts to improve soil health or bioremediation strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. B4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. B4 CHC07_16, whole genome shotgun sequence.

Gene Summary

Adenine Count

1401375 bp

Thymine Count

1403305 bp

Guanine Count

2776349 bp

Cytosine Count

2764437 bp

Genome Length

8345466 bp

Protein-coding Genes

7991 genes

Non-Coding Genes

176 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
homoprotocatechuate catabolism bifunctional isomerase/decarboxylaseCHC07_07395Not AvailableNegative7566334 - 756702024535.4
3-succinoylsemialdehyde-pyridine dehydrogenaseCHC07_07396Not AvailableNegative7567034 - 756845550231.4
acetolactate synthase isozyme 3 large subunitCHC07_07397Not AvailableNegative7568452 - 757014659430.3
hypothetical proteinCHC07_07398Not AvailableNegative7570151 - 757112532882.1
hypothetical proteinCHC07_07399Not AvailableNegative7571144 - 757213934691.2
transcriptional regulator kdgrCHC07_07400Not AvailableNegative7572460 - 757322427710.4
2-halobenzoate 1,2-dioxygenase electron transfer componentCHC07_07401Not AvailablePositive7573380 - 757438135709.7
biphenyl dioxygenase subunit alphaCHC07_07402Not AvailablePositive7574402 - 757576952514.7
2-(s)-hydroxypropyl-com dehydrogenaseCHC07_07403Not AvailablePositive7575777 - 757657427081.6
biphenyl 2,3-dioxygenase subunit betaCHC07_07404Not AvailablePositive7576599 - 757718022867.2

Displaying genes 7391 – 7400 of 8167 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.