Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. B4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1401375 bp
Thymine Count
1403305 bp
Guanine Count
2776349 bp
Cytosine Count
2764437 bp
Genome Length
8345466 bp
Protein-coding Genes
7991 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pcp degradation transcriptional activation protein | CHC07_02213 | Not Available | Negative | 2317652 - 2318560 | 33409.0 |
| ferredoxin--nad(p)(+) reductase | CHC07_02214 | Not Available | Positive | 2318636 - 2319643 | 36315.3 |
| salicylate 5-hydroxylase, large oxygenase component | CHC07_02215 | Not Available | Positive | 2319667 - 2320932 | 48367.5 |
| salicylate 5-hydroxylase, small oxygenase component | CHC07_02216 | Not Available | Positive | 2320935 - 2321408 | 18264.5 |
| isochorismate pyruvate lyase | CHC07_02217 | Not Available | Positive | 2321412 - 2321783 | 13949.5 |
| hypothetical protein | CHC07_02218 | Not Available | Positive | 2321780 - 2322748 | 34576.0 |
| naphthalene 1,2-dioxygenase/salicylate 5-hydroxylase system, ferredoxin component | CHC07_02219 | Not Available | Positive | 2322771 - 2323091 | 11450.4 |
| dihydrofolate reductase | CHC07_02220 | Not Available | Negative | 2323138 - 2323638 | 18508.9 |
| thymidylate synthase | CHC07_02221 | Not Available | Negative | 2323649 - 2324482 | 31476.4 |
| hypothetical protein | CHC07_02222 | Not Available | Negative | 2324495 - 2324809 | 12178.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
