Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. B4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1401375 bp
Thymine Count
1403305 bp
Guanine Count
2776349 bp
Cytosine Count
2764437 bp
Genome Length
8345466 bp
Protein-coding Genes
7991 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase iron-sulfur subunit | CHC07_01983 | Not Available | Negative | 2079919 - 2080620 | 26580.2 |
| succinate dehydrogenase flavoprotein subunit | CHC07_01984 | Not Available | Negative | 2080644 - 2082455 | 65917.4 |
| succinate dehydrogenase hydrophobic membrane anchor subunit | CHC07_01985 | Not Available | Negative | 2082461 - 2082826 | 13774.3 |
| succinate dehydrogenase cytochrome b556 subunit | CHC07_01986 | Not Available | Negative | 2082878 - 2083324 | 16537.4 |
| mannosyl-d-glycerate transport/metabolism system repressor mngr | CHC07_01987 | Not Available | Negative | 2083494 - 2084255 | 28280.9 |
| malate dehydrogenase | CHC07_01988 | Not Available | Positive | 2084448 - 2085434 | 35058.3 |
| trans-aconitate 2-methyltransferase | CHC07_01989 | Not Available | Positive | 2085457 - 2086233 | 28553.1 |
| l-malyl-coa/beta-methylmalyl-coa lyase | CHC07_01990 | Not Available | Positive | 2086289 - 2087287 | 35204.0 |
| hypothetical protein | CHC07_01991 | Not Available | Positive | 2087319 - 2087885 | 20316.7 |
| aconitate hydratase b | CHC07_01992 | Not Available | Positive | 2087966 - 2090551 | 92756.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
