Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. B4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1401375 bp
Thymine Count
1403305 bp
Guanine Count
2776349 bp
Cytosine Count
2764437 bp
Genome Length
8345466 bp
Protein-coding Genes
7991 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate biosynthesis protein alga | CHC07_01933 | Not Available | Negative | 2028991 - 2030421 | 51614.1 |
| putative sugar transferase epsl | CHC07_01934 | Not Available | Negative | 2030424 - 2031143 | 27685.6 |
| ribonuclease e | CHC07_01935 | Not Available | Negative | 2031678 - 2034674 | 109778.0 |
| ribosomal large subunit pseudouridine synthase c | CHC07_01936 | Not Available | Positive | 2035214 - 2036269 | 38423.8 |
| pyrophosphatase ppax | CHC07_01937 | Not Available | Positive | 2036262 - 2036930 | 24525.2 |
| hypothetical protein | CHC07_01938 | Not Available | Positive | 2036941 - 2037306 | 13246.7 |
| putative signal peptide peptidase sppa | CHC07_01939 | Not Available | Positive | 2037308 - 2038330 | 37041.3 |
| inner membrane protein ybjj | CHC07_01940 | Not Available | Negative | 2038331 - 2039467 | 38441.3 |
| ribosomal rna small subunit methyltransferase i | CHC07_01941 | Not Available | Negative | 2039485 - 2040246 | 26975.8 |
| maf-like protein ycef | CHC07_01942 | Not Available | Negative | 2040243 - 2040824 | 20900.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
