Ponticaulis sp.

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomonadales

Family

Hyphomonadaceae

Genus

Ponticaulis

Description

Ponticaulis sp. is characterized by having four replicons, which suggests a complex genomic architecture potentially allowing for diverse metabolic capabilities. The organism is represented by several accessions in genomic databases: NZIC00000000.1, PBNO00000000.1, NZLU00000000.1, and NZUJ00000000.1. These accessions indicate the availability of genomic sequences that can facilitate further research into its biology and taxonomy. The presence of multiple replicons in Ponticaulis sp. may be significant in terms of its adaptability and ecological role. In microbial communities, such genomic structures can enhance genetic diversity and enable the organism to thrive in varying environmental conditions. This trait may also reflect the organism's evolutionary strategies, allowing it to engage in various metabolic processes or respond to ecological pressures. In summary, the distinct genomic feature of having four replicons, along with the multiple accessions available for study, highlights the potential complexity and adaptability of Ponticaulis sp. in its ecological niche. Understanding the implications of these traits may provide insights into the organism's role in its environment and its interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomonadales
FamilyHyphomonadaceae
GenusPonticaulis
SpeciesPonticaulis sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Ponticaulis sp. isolate NAT89 151625, whole genome shotgun

Gene Summary

Adenine Count

799334 bp

Thymine Count

790108 bp

Guanine Count

941201 bp

Cytosine Count

954901 bp

Genome Length

3485647 bp

Protein-coding Genes

3323 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-isopropylmalate dehydratase small subunitCMK08_02840Not AvailablePositive564173 - 56477822122.6
3-ketosteroid dehydrogenaseCMK08_02845Not AvailablePositive564780 - 56615647553.3
hypothetical proteinCMK08_02850Not AvailablePositive566180 - 56737943711.1
hydroxymethylglutaryl-coa lyaseCMK08_02855Not AvailablePositive567425 - 56842935215.3
sodium:proline symporterCMK08_02860Not AvailablePositive568452 - 56986448885.1
iclr family transcriptional regulatorCMK08_02865Not AvailableNegative569871 - 57074331734.1
gntr family transcriptional regulatorCMK08_02870Not AvailableNegative570948 - 57177530391.2
polysaccharide deacetylaseCMK08_02875Not AvailableNegative571772 - 57267434114.6
polysaccharide deacetylaseCMK08_02880Not AvailableNegative572671 - 57362436462.7
n-carbamoylsarcosine amidohydrolaseCMK08_02885Not AvailableNegative573624 - 57430125193.7

Displaying genes 4021 – 4030 of 14495 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.