Ponticaulis sp.

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomonadales

Family

Hyphomonadaceae

Genus

Ponticaulis

Description

Ponticaulis sp. is characterized by having four replicons, which suggests a complex genomic architecture potentially allowing for diverse metabolic capabilities. The organism is represented by several accessions in genomic databases: NZIC00000000.1, PBNO00000000.1, NZLU00000000.1, and NZUJ00000000.1. These accessions indicate the availability of genomic sequences that can facilitate further research into its biology and taxonomy. The presence of multiple replicons in Ponticaulis sp. may be significant in terms of its adaptability and ecological role. In microbial communities, such genomic structures can enhance genetic diversity and enable the organism to thrive in varying environmental conditions. This trait may also reflect the organism's evolutionary strategies, allowing it to engage in various metabolic processes or respond to ecological pressures. In summary, the distinct genomic feature of having four replicons, along with the multiple accessions available for study, highlights the potential complexity and adaptability of Ponticaulis sp. in its ecological niche. Understanding the implications of these traits may provide insights into the organism's role in its environment and its interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomonadales
FamilyHyphomonadaceae
GenusPonticaulis
SpeciesPonticaulis sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Ponticaulis sp. isolate NAT89 151625, whole genome shotgun

Gene Summary

Adenine Count

799334 bp

Thymine Count

790108 bp

Guanine Count

941201 bp

Cytosine Count

954901 bp

Genome Length

3485647 bp

Protein-coding Genes

3323 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yqae/pmp3 family membrane proteinCMK04_09325Not AvailablePositive1894320 - 18945086507.31
trna dihydrouridine(20/20a) synthase dusaCMK04_09330Not AvailablePositive1894622 - 189564137804.1
hypothetical proteinCMK04_09335Not AvailablePositive1895718 - 189654227827.3
tigr02281 family clan aa aspartic proteaseCMK04_09340Not AvailableNegative1896550 - 189707419033.7
duf1289 domain-containing proteinCMK04_09345Not AvailableNegative1897090 - 18972877243.78
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseCMK04_09350Not AvailablePositive1897445 - 189842834162.2
pimeloyl-coa dehydrogenase large subunitCMK04_09355Not AvailablePositive1898557 - 189974744316.5
pimeloyl-coa dehydrogenase small subunitCMK04_09360Not AvailablePositive1899807 - 190096442214.0
hypothetical proteinCMK04_09365Not AvailablePositive1901038 - 190171825062.0
hypothetical proteinCMK04_09370Not AvailablePositive1901750 - 190239723716.4

Displaying genes 12791 – 12800 of 14495 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.