Shewanella bicestrii str. JAB-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella bicestrii str. JAB-1 is a species of bacteria that possesses several notable characteristics. A key feature of this strain is the presence of flagella, which are important for motility and can aid in navigating various environments. Additionally, S. bicestrii str. JAB-1 has a unique genomic structure, consisting of three replicons. This multi-replicon arrangement can offer advantages in terms of genetic adaptability and stability, allowing the organism to thrive in diverse conditions. The strain has been cataloged with specific genomic accessions: NZ_CP022360.1, NZ_CP022358.1, and NZ_CP022359.1. These accessions indicate the availability of its complete genomic sequences, which can be utilized for further research and analysis of its genetic makeup and functional capabilities. The ecological insight into Shewanella bicestrii str. JAB-1 lies in its potential roles within its environment. The presence of flagella suggests that this bacterium is likely motile and can explore various niches, which may include marine sediments or other aquatic environments. Its ability to thrive in such habitats could be linked to its metabolic versatility, making it an important player in biogeochemical cycles, such as those involving carbon and nitrogen. Understanding the traits of S. bicestrii str. JAB-1 could enhance our knowledge of microbial ecology and the functional roles of bacteria in ecosystem processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella bicestrii
StrainJAB-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella bicestrii strain JAB-1 plasmid pSHE-2, complete

Gene Summary

Adenine Count

3287 bp

Thymine Count

2915 bp

Guanine Count

2035 bp

Cytosine Count

2242 bp

Genome Length

10479 bp

Protein-coding Genes

15 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligaseCF168_RS16810Not AvailableNegative3850633 - 385203050400.4
hypothetical proteinCF168_RS16815Not AvailableNegative3852199 - 385283424260.8
sterol desaturase family proteinCF168_RS16820Not AvailableNegative3853032 - 385389533358.9
duf2804 domain-containing proteinCF168_RS16825Not AvailableNegative3853940 - 385497138473.7
porin family proteinCF168_RS16830Not AvailableNegative3855213 - 385577620622.1
yajg family lipoproteinCF168_RS16835Not AvailablePositive3855913 - 385647921051.4
peptidylprolyl isomeraseCF168_RS16840Not AvailablePositive3856513 - 385710021694.0
hypothetical proteinCF168_RS16845Not AvailablePositive3857170 - 385749012397.8
ampg family muropeptide mfs transporterCF168_RS16850Not AvailablePositive3857640 - 385903751503.7
yajq family cyclic di-gmp-binding proteinCF168_RS16855Not AvailableNegative3859128 - 385961318397.9

Displaying genes 3581 – 3590 of 4407 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.