Shewanella bicestrii str. JAB-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella bicestrii str. JAB-1 is a species of bacteria that possesses several notable characteristics. A key feature of this strain is the presence of flagella, which are important for motility and can aid in navigating various environments. Additionally, S. bicestrii str. JAB-1 has a unique genomic structure, consisting of three replicons. This multi-replicon arrangement can offer advantages in terms of genetic adaptability and stability, allowing the organism to thrive in diverse conditions. The strain has been cataloged with specific genomic accessions: NZ_CP022360.1, NZ_CP022358.1, and NZ_CP022359.1. These accessions indicate the availability of its complete genomic sequences, which can be utilized for further research and analysis of its genetic makeup and functional capabilities. The ecological insight into Shewanella bicestrii str. JAB-1 lies in its potential roles within its environment. The presence of flagella suggests that this bacterium is likely motile and can explore various niches, which may include marine sediments or other aquatic environments. Its ability to thrive in such habitats could be linked to its metabolic versatility, making it an important player in biogeochemical cycles, such as those involving carbon and nitrogen. Understanding the traits of S. bicestrii str. JAB-1 could enhance our knowledge of microbial ecology and the functional roles of bacteria in ecosystem processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella bicestrii
StrainJAB-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella bicestrii strain JAB-1 plasmid pSHE-2, complete

Gene Summary

Adenine Count

3287 bp

Thymine Count

2915 bp

Guanine Count

2035 bp

Cytosine Count

2242 bp

Genome Length

10479 bp

Protein-coding Genes

15 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
isovaleryl-coa dehydrogenaseCF168_RS12370Not AvailablePositive2855603 - 285677242124.6
carboxyl transferase domain-containing proteinCF168_RS12375Not AvailablePositive2856873 - 285848057911.9
enoyl-coa hydratase-related proteinCF168_RS12380Not AvailablePositive2858540 - 285938530813.9
acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alphaCF168_RS12385Not AvailablePositive2859385 - 286142474170.2
hydroxymethylglutaryl-coa lyaseCF168_RS12390Not AvailablePositive2861425 - 286235732729.7
coa transferase subunit aCF168_RS12395Not AvailablePositive2862426 - 286313025124.5
3-oxoacid coa-transferase subunit bCF168_RS12400Not AvailablePositive2863241 - 286389723243.5
hypothetical proteinCF168_RS12405Not AvailablePositive2864302 - 286531839092.8
dj-1/pfpi family proteinCF168_RS12410Not AvailablePositive2865440 - 286604221521.9
cytoplasmic proteinCF168_RS12415Not AvailablePositive2866074 - 286638811835.8

Displaying genes 2701 – 2710 of 4407 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.