Shewanella bicestrii str. JAB-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella bicestrii str. JAB-1 is a species of bacteria that possesses several notable characteristics. A key feature of this strain is the presence of flagella, which are important for motility and can aid in navigating various environments. Additionally, S. bicestrii str. JAB-1 has a unique genomic structure, consisting of three replicons. This multi-replicon arrangement can offer advantages in terms of genetic adaptability and stability, allowing the organism to thrive in diverse conditions. The strain has been cataloged with specific genomic accessions: NZ_CP022360.1, NZ_CP022358.1, and NZ_CP022359.1. These accessions indicate the availability of its complete genomic sequences, which can be utilized for further research and analysis of its genetic makeup and functional capabilities. The ecological insight into Shewanella bicestrii str. JAB-1 lies in its potential roles within its environment. The presence of flagella suggests that this bacterium is likely motile and can explore various niches, which may include marine sediments or other aquatic environments. Its ability to thrive in such habitats could be linked to its metabolic versatility, making it an important player in biogeochemical cycles, such as those involving carbon and nitrogen. Understanding the traits of S. bicestrii str. JAB-1 could enhance our knowledge of microbial ecology and the functional roles of bacteria in ecosystem processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella bicestrii
StrainJAB-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella bicestrii strain JAB-1 plasmid pSHE-2, complete

Gene Summary

Adenine Count

3287 bp

Thymine Count

2915 bp

Guanine Count

2035 bp

Cytosine Count

2242 bp

Genome Length

10479 bp

Protein-coding Genes

15 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methionine--trna ligaseCF168_RS11920Not AvailablePositive2743843 - 274587376194.7
aec family transporterCF168_RS11925Not AvailablePositive2746168 - 274712433895.6
nif3-like dinuclear metal center hexameric proteinCF168_RS11930Not AvailableNegative2747234 - 274798627400.6
glycine zipper 2tm domain-containing proteinCF168_RS11935Not AvailableNegative2748047 - 274851716640.1
leucyl/phenylalanyl-trna--protein transferaseCF168_RS11940Not AvailablePositive2748572 - 274928226804.3
arginyltransferaseCF168_RS11945Not AvailablePositive2749272 - 274998827818.4
translation initiation factor if-1CF168_RS11950Not AvailablePositive2750071 - 27502898273.24
atp-dependent clp protease atp-binding subunit clpaCF168_RS11955Not AvailableNegative2750394 - 275266183644.2
atp-dependent clp protease adapter clpsCF168_RS11960Not AvailableNegative2752704 - 275301211722.2
cold shock domain-containing protein cspdCF168_RS11965Not AvailablePositive2753206 - 27534127381.71

Displaying genes 2611 – 2620 of 4407 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.