Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella bicestrii |
| Strain | JAB-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella bicestrii strain JAB-1 plasmid pSHE-2, complete
Gene Summary
Adenine Count
3287 bp
Thymine Count
2915 bp
Guanine Count
2035 bp
Cytosine Count
2242 bp
Genome Length
10479 bp
Protein-coding Genes
15 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fdhf/ydep family oxidoreductase | CF168_RS11370 | Not Available | Positive | 2608633 - 2610954 | 84805.8 |
| hydrogenase nickel incorporation protein hypb | CF168_RS11375 | Not Available | Positive | 2611167 - 2611928 | 28159.5 |
| hypc/hybg/hupf family hydrogenase formation chaperone | CF168_RS11380 | Not Available | Positive | 2611928 - 2612173 | 9054.92 |
| hydrogenase formation protein hypd | CF168_RS11385 | Not Available | Positive | 2612233 - 2613372 | 41866.7 |
| hydrogenase expression/formation protein hype | CF168_RS11390 | Not Available | Positive | 2613365 - 2614384 | 36061.6 |
| hydrogenase/urease nickel incorporation protein hypa | CF168_RS11395 | Not Available | Positive | 2614384 - 2614740 | 13395.2 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | CF168_RS11400 | Not Available | Negative | 2614857 - 2615795 | 35076.2 |
| integration host factor subunit alpha | CF168_RS11405 | Not Available | Negative | 2615892 - 2616188 | 10947.2 |
| phenylalanine--trna ligase subunit beta | CF168_RS11410 | Not Available | Negative | 2616192 - 2618579 | 86396.2 |
| phenylalanine--trna ligase subunit alpha | CF168_RS11415 | Not Available | Negative | 2618594 - 2619577 | 37316.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

