Shewanella bicestrii str. JAB-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella bicestrii str. JAB-1 is a species of bacteria that possesses several notable characteristics. A key feature of this strain is the presence of flagella, which are important for motility and can aid in navigating various environments. Additionally, S. bicestrii str. JAB-1 has a unique genomic structure, consisting of three replicons. This multi-replicon arrangement can offer advantages in terms of genetic adaptability and stability, allowing the organism to thrive in diverse conditions. The strain has been cataloged with specific genomic accessions: NZ_CP022360.1, NZ_CP022358.1, and NZ_CP022359.1. These accessions indicate the availability of its complete genomic sequences, which can be utilized for further research and analysis of its genetic makeup and functional capabilities. The ecological insight into Shewanella bicestrii str. JAB-1 lies in its potential roles within its environment. The presence of flagella suggests that this bacterium is likely motile and can explore various niches, which may include marine sediments or other aquatic environments. Its ability to thrive in such habitats could be linked to its metabolic versatility, making it an important player in biogeochemical cycles, such as those involving carbon and nitrogen. Understanding the traits of S. bicestrii str. JAB-1 could enhance our knowledge of microbial ecology and the functional roles of bacteria in ecosystem processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella bicestrii
StrainJAB-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella bicestrii strain JAB-1 plasmid pSHE-2, complete

Gene Summary

Adenine Count

3287 bp

Thymine Count

2915 bp

Guanine Count

2035 bp

Cytosine Count

2242 bp

Genome Length

10479 bp

Protein-coding Genes

15 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mtrb/piob family decaheme-associated outer membrane proteinCF168_RS07510Not AvailableNegative1725887 - 172797477127.1
decaheme c-type cytochrome mtraCF168_RS07515Not AvailableNegative1727987 - 172897635654.2
omca/mtrc family decaheme c-type cytochromeCF168_RS07520Not AvailableNegative1729045 - 173099768215.9
omca/mtrc family decaheme c-type cytochromeCF168_RS07530Not AvailableNegative1731330 - 173352578068.5
omca/mtrc family decaheme c-type cytochromeCF168_RS07535Not AvailableNegative1733772 - 173569167429.4
mtrb/piob family decaheme-associated outer membrane proteinCF168_RS07540Not AvailableNegative1735727 - 173786579511.4
dmse family decaheme c-type cytochromeCF168_RS07545Not AvailableNegative1737879 - 173884434999.3
ferrous iron transport protein aCF168_RS07550Not AvailablePositive1739271 - 17395108794.91
fe(2+) transporter permease subunit feobCF168_RS07555Not AvailablePositive1739503 - 174179781867.9
glutamine--trna ligaseCF168_RS07560Not AvailablePositive1741981 - 174365164173.7

Displaying genes 1731 – 1740 of 4407 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.