Sphingobium sp. D43FB

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. D43FB is characterized by the presence of flagella, which suggests that this bacterium is motile. It possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genomic information for Sphingobium sp. D43FB is cataloged under the accession number NMUA00000000.1. The presence of flagella not only facilitates movement but may also play a significant role in the bacterium's ability to colonize different ecological niches, potentially enhancing its survival in competitive microbial communities. Sphingobium species are known for their capability to degrade environmental pollutants, which may imply that D43FB could be involved in bioremediation processes. The single replicon feature suggests an efficient genomic organization, likely aiding in the rapid adaptation to environmental changes or stressors. Overall, the motility and genomic characteristics of Sphingobium sp. D43FB could provide insights into its ecological roles, particularly in pollutant degradation and its ability to thrive in diverse habitats. The study of such traits in Sphingobium sp. D43FB can contribute to our understanding of microbial dynamics in ecosystems impacted by anthropogenic activities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. D43FB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. D43FB NODE_333_length_223_cov_24.0208, whole

Gene Summary

Adenine Count

943085 bp

Thymine Count

939278 bp

Guanine Count

1566142 bp

Cytosine Count

1570210 bp

Genome Length

5018715 bp

Protein-coding Genes

4586 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hnh endonucleaseSxD43FB_02280Not AvailableNegative496300 - 49686621766.1
trna glutamyl-q(34) synthetase gluqrsSxD43FB_02285Not AvailablePositive496961 - 49795335605.5
twin transmembrane helix small proteinSxD43FB_02290Not AvailablePositive497963 - 4981998333.78
atp:cob(i)alamin adenosyltransferaseSxD43FB_02295Not AvailablePositive498206 - 49877520120.1
ggdef domain-containing proteinSxD43FB_02300Not AvailablePositive498904 - 49975531212.8
ergothioneine biosynthesis protein egtbSxD43FB_02305Not AvailablePositive499832 - 50110046884.0
l-histidine n(alpha)-methyltransferaseSxD43FB_02310Not AvailablePositive501106 - 50206535096.7
hypothetical proteinSxD43FB_02315Not AvailableNegative502188 - 50324937390.9
nupc/nupg family nucleoside cnt transporterSxD43FB_02320Not AvailableNegative503317 - 50464245265.7
mfs transporterSxD43FB_02325Not AvailablePositive504816 - 50605443046.6

Displaying genes 491 – 500 of 4667 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.