Sphingobium sp. D43FB

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. D43FB is characterized by the presence of flagella, which suggests that this bacterium is motile. It possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genomic information for Sphingobium sp. D43FB is cataloged under the accession number NMUA00000000.1. The presence of flagella not only facilitates movement but may also play a significant role in the bacterium's ability to colonize different ecological niches, potentially enhancing its survival in competitive microbial communities. Sphingobium species are known for their capability to degrade environmental pollutants, which may imply that D43FB could be involved in bioremediation processes. The single replicon feature suggests an efficient genomic organization, likely aiding in the rapid adaptation to environmental changes or stressors. Overall, the motility and genomic characteristics of Sphingobium sp. D43FB could provide insights into its ecological roles, particularly in pollutant degradation and its ability to thrive in diverse habitats. The study of such traits in Sphingobium sp. D43FB can contribute to our understanding of microbial dynamics in ecosystems impacted by anthropogenic activities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. D43FB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. D43FB NODE_333_length_223_cov_24.0208, whole

Gene Summary

Adenine Count

943085 bp

Thymine Count

939278 bp

Guanine Count

1566142 bp

Cytosine Count

1570210 bp

Genome Length

5018715 bp

Protein-coding Genes

4586 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tat pathway signal sequence domain proteinSxD43FB_16590Not AvailableNegative3532890 - 353357625084.1
tonb-dependent receptorSxD43FB_16595Not AvailableNegative3533685 - 353639997335.2
gntr family transcriptional regulatorSxD43FB_16600Not AvailableNegative3537008 - 353766124330.0
peptidase s15SxD43FB_16605Not AvailablePositive3537781 - 353950562119.8
tonb-dependent receptorSxD43FB_16610Not AvailablePositive3539554 - 354223595206.4
capsule biosynthesis proteinSxD43FB_16615Not AvailablePositive3542254 - 354336938297.7
hypothetical proteinSxD43FB_16620Not AvailablePositive3543366 - 354381816173.5
c4-dicarboxylate abc transporter permeaseSxD43FB_16625Not AvailablePositive3543815 - 354512545648.0
hypothetical proteinSxD43FB_16630Not AvailablePositive3545122 - 354601232244.1
hypothetical proteinSxD43FB_16635Not AvailablePositive3546051 - 354809372516.0

Displaying genes 3281 – 3290 of 4667 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.