Sphingobium sp. D43FB

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. D43FB is characterized by the presence of flagella, which suggests that this bacterium is motile. It possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genomic information for Sphingobium sp. D43FB is cataloged under the accession number NMUA00000000.1. The presence of flagella not only facilitates movement but may also play a significant role in the bacterium's ability to colonize different ecological niches, potentially enhancing its survival in competitive microbial communities. Sphingobium species are known for their capability to degrade environmental pollutants, which may imply that D43FB could be involved in bioremediation processes. The single replicon feature suggests an efficient genomic organization, likely aiding in the rapid adaptation to environmental changes or stressors. Overall, the motility and genomic characteristics of Sphingobium sp. D43FB could provide insights into its ecological roles, particularly in pollutant degradation and its ability to thrive in diverse habitats. The study of such traits in Sphingobium sp. D43FB can contribute to our understanding of microbial dynamics in ecosystems impacted by anthropogenic activities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. D43FB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. D43FB NODE_333_length_223_cov_24.0208, whole

Gene Summary

Adenine Count

943085 bp

Thymine Count

939278 bp

Guanine Count

1566142 bp

Cytosine Count

1570210 bp

Genome Length

5018715 bp

Protein-coding Genes

4586 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorSxD43FB_15375Not AvailableNegative3256451 - 325735333150.2
methylmalonate-semialdehyde dehydrogenase (coa acylating)SxD43FB_15380Not AvailablePositive3257461 - 325896053167.7
endonucleaseSxD43FB_15385Not AvailableNegative3259045 - 325935011665.2
acyl-coa dehydrogenaseSxD43FB_15390Not AvailablePositive3259419 - 326056141191.0
enoyl-coa hydrataseSxD43FB_15395Not AvailablePositive3260661 - 326171937852.4
3-hydroxyisobutyrate dehydrogenaseSxD43FB_15400Not AvailablePositive3261865 - 326274929784.7
peptidase m19SxD43FB_15405Not AvailableNegative3262856 - 326407943784.8
tonb-dependent receptorSxD43FB_15410Not AvailableNegative3264079 - 326646685952.2
enoyl-coa hydrataseSxD43FB_15415Not AvailableNegative3266628 - 326740427492.4
short-chain dehydrogenaseSxD43FB_15420Not AvailableNegative3267647 - 326848629864.7

Displaying genes 3041 – 3050 of 4667 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.