Sphingobium sp. D43FB

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. D43FB is characterized by the presence of flagella, which suggests that this bacterium is motile. It possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genomic information for Sphingobium sp. D43FB is cataloged under the accession number NMUA00000000.1. The presence of flagella not only facilitates movement but may also play a significant role in the bacterium's ability to colonize different ecological niches, potentially enhancing its survival in competitive microbial communities. Sphingobium species are known for their capability to degrade environmental pollutants, which may imply that D43FB could be involved in bioremediation processes. The single replicon feature suggests an efficient genomic organization, likely aiding in the rapid adaptation to environmental changes or stressors. Overall, the motility and genomic characteristics of Sphingobium sp. D43FB could provide insights into its ecological roles, particularly in pollutant degradation and its ability to thrive in diverse habitats. The study of such traits in Sphingobium sp. D43FB can contribute to our understanding of microbial dynamics in ecosystems impacted by anthropogenic activities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. D43FB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. D43FB NODE_333_length_223_cov_24.0208, whole

Gene Summary

Adenine Count

943085 bp

Thymine Count

939278 bp

Guanine Count

1566142 bp

Cytosine Count

1570210 bp

Genome Length

5018715 bp

Protein-coding Genes

4586 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2442 domain-containing proteinSxD43FB_11270Not AvailableNegative2365653 - 236606614108.7
duf4160 domain-containing proteinSxD43FB_11275Not AvailableNegative2366063 - 23663119332.32
type ii toxin-antitoxin system mrna interferase toxin, rele/stbe familySxD43FB_11280Not AvailableNegative2366359 - 236662510330.6
tray domain-containing proteinSxD43FB_11285Not AvailableNegative2366609 - 23668278124.64
rele/pare family toxinSxD43FB_11290Not AvailableNegative2366898 - 236718510990.4
addiction module antitoxinSxD43FB_11295Not AvailableNegative2367182 - 23674278889.28
abrb/maze/spovt family dna-binding domain-containing proteinSxD43FB_11300Not AvailablePositive2367522 - 23677498296.27
type ii toxin-antitoxin system death-on-curing family toxinSxD43FB_11305Not AvailablePositive2367756 - 236816314798.4
hypothetical proteinSxD43FB_11310Not AvailableNegative2368177 - 236849411754.3
metal abc transporter permeaseSxD43FB_11315Not AvailablePositive2368746 - 237059668014.6

Displaying genes 2231 – 2240 of 4667 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.