Thalassococcus sp. S3

ovoid

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Thalassococcus

Description

Thalassococcus sp. S3 is a Gram-negative, ovoid-shaped bacterium characterized by having three replicons. This structural feature is indicative of its genetic organization, which may play a role in its adaptability and evolution in marine environments. The organism is cataloged under several accessions, specifically NZ_CP022304.1, NZ_CP022305.1, and NZ_CP022306.1, which provide a basis for genomic studies and further research into its physiological characteristics and ecological roles. The presence of multiple replicons can be associated with various genomic arrangements and potential advantages in horizontal gene transfer, which may enhance its survival and competitiveness in diverse habitats. Ecologically, the attributes of Thalassococcus sp. S3 suggest that it may occupy a niche within marine ecosystems, contributing to nutrient cycling and possibly influencing microbial community dynamics. Its Gram-negative nature indicates a specific cell wall structure that may confer resistance to certain environmental stresses, enabling it to thrive in fluctuating conditions often found in marine environments. This could contribute to its ecological success and interaction with other microorganisms and higher trophic levels in its habitat. Understanding these traits in Thalassococcus sp. S3 can provide insights into its role within marine microbiomes and the broader implications for marine ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusThalassococcus
SpeciesThalassococcus sp. S3
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thalassococcus sp. S3 plasmid pS3B, complete sequence.

Gene Summary

Adenine Count

11964 bp

Thymine Count

11751 bp

Guanine Count

19353 bp

Cytosine Count

20163 bp

Genome Length

63231 bp

Protein-coding Genes

43 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
laci family dna-binding transcriptional regulatorCFI11_RS24050Not AvailableNegative6024 - 702535559.7
d-erythronate dehydrogenaseCFI11_RS24055Not AvailablePositive7166 - 815234634.7
trap transporter substrate-binding proteinCFI11_RS24060Not AvailablePositive8182 - 914434812.1
trap transporter small permeaseCFI11_RS24065Not AvailablePositive9219 - 974019030.7
trap transporter large permeaseCFI11_RS24070Not AvailablePositive9737 - 1101744034.3
3-oxo-tetronate kinaseCFI11_RS24075Not AvailablePositive11128 - 1237842919.7
3-oxo-tetronate 4-phosphate decarboxylaseCFI11_RS24080Not AvailablePositive12375 - 1301923252.9
hydroxypyruvate isomerase family proteinCFI11_RS24085Not AvailablePositive13019 - 1378327766.9
lysr family transcriptional regulatorCFI11_RS24090Not AvailableNegative13780 - 1469133986.9
dipeptidaseCFI11_RS24095Not AvailablePositive14815 - 1587338255.6

Displaying genes 141 – 150 of 177 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.