Raineya orbicola str. SPSPC-11

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Raineyaceae

Genus

Raineya

Description

Raineya orbicola str. SPSPC-11 is characterized by having a single replicon, which indicates a streamlined genomic structure. The organism is cataloged under the accession number NKXO00000000.1, providing a unique identifier for its genomic data in biological databases. While specific traits regarding its morphology, metabolism, or ecological niche are not provided, the single replicon suggests a potential for efficient replication and maintenance of its genetic material. This trait can be advantageous for survival and adaptation in various environments, as organisms with fewer replicons may allocate resources more efficiently towards growth and reproduction. Understanding the genomic framework of Raineya orbicola str. SPSPC-11 may offer insights into its evolutionary strategies and ecological roles. Given its streamlined genetic architecture, this bacterium could be well-suited for niche environments where rapid adaptation and resource utilization are critical for survival. Further research could elucidate its specific ecological interactions and contributions to microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyRaineyaceae
GenusRaineya
SpeciesRaineya orbicola
StrainSPSPC-11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Raineya orbicola strain SPSPC-11 Contig0104, whole genome shotgun

Gene Summary

Adenine Count

961042 bp

Thymine Count

955566 bp

Guanine Count

577137 bp

Cytosine Count

576468 bp

Genome Length

3070213 bp

Protein-coding Genes

2685 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulatorRain11_0077Not AvailableNegative81299 - 8177518442.6
cytokinin riboside 5'-monophosphate phosphoribohydrolaseRain11_0078Not AvailableNegative81891 - 8261927065.6
hypothetical proteinRain11_0079Not AvailableNegative82715 - 828434844.89
hypothetical proteinRain11_0080Not AvailableNegative82928 - 8400141879.5
abc-type dipeptide/oligopeptide/nickel transport system permease componentRain11_0081Not AvailableNegative84031 - 8508939316.8
fructose-16-bisphosphataseRain11_0082Not AvailableNegative85173 - 8597329908.1
fkbp-type peptidyl-prolyl cis-trans isomerases 2Rain11_0083Not AvailableNegative85973 - 8646118069.5
hypothetical proteinRain11_0084Not AvailableNegative86647 - 91272176461.0
trna threonylcarbamoyl adenosine modification protein ygjdRain11_0085Not AvailablePositive91362 - 9236636754.4
hypothetical proteinRain11_0086Not AvailableNegative92363 - 9316329989.5

Displaying genes 81 – 90 of 2729 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.