Raineya orbicola str. SPSPC-11

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Raineyaceae

Genus

Raineya

Description

Raineya orbicola str. SPSPC-11 is characterized by having a single replicon, which indicates a streamlined genomic structure. The organism is cataloged under the accession number NKXO00000000.1, providing a unique identifier for its genomic data in biological databases. While specific traits regarding its morphology, metabolism, or ecological niche are not provided, the single replicon suggests a potential for efficient replication and maintenance of its genetic material. This trait can be advantageous for survival and adaptation in various environments, as organisms with fewer replicons may allocate resources more efficiently towards growth and reproduction. Understanding the genomic framework of Raineya orbicola str. SPSPC-11 may offer insights into its evolutionary strategies and ecological roles. Given its streamlined genetic architecture, this bacterium could be well-suited for niche environments where rapid adaptation and resource utilization are critical for survival. Further research could elucidate its specific ecological interactions and contributions to microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyRaineyaceae
GenusRaineya
SpeciesRaineya orbicola
StrainSPSPC-11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Raineya orbicola strain SPSPC-11 Contig0104, whole genome shotgun

Gene Summary

Adenine Count

961042 bp

Thymine Count

955566 bp

Guanine Count

577137 bp

Cytosine Count

576468 bp

Genome Length

3070213 bp

Protein-coding Genes

2685 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
morn repeat variantRain11_2224Not AvailableNegative2551282 - 255253848958.9
helix-turn-helix proteinRain11_2225Not AvailableNegative2552646 - 255312218334.7
3-hydroxyacyl-coa dehydrogenaseRain11_2226Not AvailablePositive2553487 - 255437432213.4
tetrahydrodipicolinate n-succinyltransferaseRain11_2227Not AvailableNegative2554419 - 255523429469.8
iron dependent repressor, metal binding and dimerization domainRain11_2228Not AvailablePositive2555547 - 255623626541.8
abc-type metal ion transport system periplasmic component/surface adhesinRain11_2229Not AvailablePositive2556229 - 255715535565.6
abc-type mn/zn transport systems atpase componentRain11_2230Not AvailablePositive2557164 - 255791028239.4
abc-type mn2+/zn2+ transport systems permease componentRain11_2231Not AvailablePositive2557907 - 255872229965.1
abc-type mn2+/zn2+ transport system permease componentRain11_2232Not AvailablePositive2558722 - 255956731192.2
acrb/acrd/acrf familyRain11_2233Not AvailableNegative2559581 - 2562742120827.0

Displaying genes 2261 – 2270 of 2729 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.