Comamonadaceae bacterium PBBC2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Description

Comamonadaceae bacterium PBBC2 is characterized by having a single replicon, which is significant in understanding its genomic structure and stability. The genome of this bacterium is cataloged under the accession number NKIO00000000.1, providing a reference point for researchers interested in its genetic makeup. As a member of the Comamonadaceae family, this bacterium may play a role in various ecological niches, potentially contributing to nutrient cycling and biodegradation processes. The Comamonadaceae family is known for its diverse metabolic capabilities, which may allow PBBC2 to interact with its environment in unique ways. Understanding the traits of Comamonadaceae bacterium PBBC2, particularly its replicon count and genomic information, can inform further studies on its ecological role and potential applications in biotechnology. Its single replicon may suggest a streamlined genomic organization, which could influence its adaptability and efficiency in utilizing available resources. This adaptability is critical for survival in varying environments, indicating that PBBC2 could have significant implications for environmental microbiology and bioremediation efforts.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Comamonadaceae bacterium PBBC2 NODE_31542, whole genome

Gene Summary

Adenine Count

748947 bp

Thymine Count

742043 bp

Guanine Count

1118941 bp

Cytosine Count

1123273 bp

Genome Length

3733528 bp

Protein-coding Genes

3456 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
biotin--[acetyl-coa-carboxylase] ligaseCFE39_02075Not AvailableNegative438339 - 43910327454.8
set domain-containing protein-lysine n-methyltransferaseCFE39_02080Not AvailableNegative439202 - 43987324543.0
dna topoisomerase iiiCFE39_02085Not AvailablePositive439982 - 442912107596.0
hypothetical proteinCFE39_02090Not AvailablePositive443278 - 44531472440.2
gluconolaconaseCFE39_02095Not AvailableNegative445348 - 44627732868.8
hypothetical proteinCFE39_02100Not AvailablePositive446390 - 44692019045.1
acyl-coa synthetaseCFE39_02105Not AvailableNegative446927 - 44881665852.6
6-phosphogluconate dehydrogenaseCFE39_02110Not AvailablePositive448974 - 44986730822.3
ornithine cyclodeaminaseCFE39_02115Not AvailablePositive449864 - 45079332148.4
hypothetical proteinCFE39_02120Not AvailablePositive450838 - 45118512293.9

Displaying genes 411 – 420 of 3504 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.