Comamonadaceae bacterium PBBC1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Description

Comamonadaceae bacterium PBBC1 is characterized by its single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. The organism is cataloged under the accession number NKIP00000000.1, which serves as a reference for its genomic data. As a member of the Comamonadaceae family, this bacterium is likely to exhibit traits common to its relatives, such as the ability to degrade various organic compounds, which can be beneficial in bioremediation processes. The single replicon suggests that Comamonadaceae bacterium PBBC1 may have a simpler regulatory framework compared to organisms with multiple replicons, potentially allowing for rapid responses to environmental changes. In ecological contexts, the presence of Comamonadaceae bacterium PBBC1 in microbial communities may play a significant role in nutrient cycling and organic matter degradation. Its adaptability and metabolic capabilities could enhance its survival in diverse habitats, contributing to the overall health and functionality of ecosystems where it is present. Understanding its specific functions and interactions within microbial communities could provide valuable insights into the ecological roles of Comamonadaceae members in natural and engineered environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Comamonadaceae bacterium PBBC1 NODE_20223, whole genome

Gene Summary

Adenine Count

956467 bp

Thymine Count

934823 bp

Guanine Count

1332877 bp

Cytosine Count

1363750 bp

Genome Length

4589522 bp

Protein-coding Genes

4163 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseCFE38_18715Not AvailableNegative4016662 - 401813152634.9
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseCFE38_18720Not AvailableNegative4018213 - 401897427745.3
fumarylacetoacetate hydrolaseCFE38_18725Not AvailableNegative4018971 - 401960322968.8
homoprotocatechuate degradation operon regulator hparCFE38_18730Not AvailableNegative4019600 - 402008818184.8
hypothetical proteinCFE38_18735Not AvailablePositive4020317 - 402300797978.9
2-nitropropane dioxygenaseCFE38_18740Not AvailablePositive4023055 - 402417639189.9
dna repair protein radaCFE38_18745Not AvailablePositive4024221 - 402559748410.8
fasciclinCFE38_18750Not AvailableNegative4025706 - 402666533038.0
glycerate kinaseCFE38_18755Not AvailablePositive4026880 - 402732015857.4
branched chain amino acid aminotransferaseCFE38_18760Not AvailablePositive4027423 - 402837335334.2

Displaying genes 3681 – 3690 of 4212 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.