Comamonadaceae bacterium PBBC1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Description

Comamonadaceae bacterium PBBC1 is characterized by its single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. The organism is cataloged under the accession number NKIP00000000.1, which serves as a reference for its genomic data. As a member of the Comamonadaceae family, this bacterium is likely to exhibit traits common to its relatives, such as the ability to degrade various organic compounds, which can be beneficial in bioremediation processes. The single replicon suggests that Comamonadaceae bacterium PBBC1 may have a simpler regulatory framework compared to organisms with multiple replicons, potentially allowing for rapid responses to environmental changes. In ecological contexts, the presence of Comamonadaceae bacterium PBBC1 in microbial communities may play a significant role in nutrient cycling and organic matter degradation. Its adaptability and metabolic capabilities could enhance its survival in diverse habitats, contributing to the overall health and functionality of ecosystems where it is present. Understanding its specific functions and interactions within microbial communities could provide valuable insights into the ecological roles of Comamonadaceae members in natural and engineered environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Comamonadaceae bacterium PBBC1 NODE_20223, whole genome

Gene Summary

Adenine Count

956467 bp

Thymine Count

934823 bp

Guanine Count

1332877 bp

Cytosine Count

1363750 bp

Genome Length

4589522 bp

Protein-coding Genes

4163 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fumarylacetoacetaseCFE38_18615Not AvailablePositive3996830 - 399815547126.6
biotin carboxylaseCFE38_18620Not AvailableNegative3998314 - 400011963028.8
asparagine amidohydrolaseCFE38_18625Not AvailablePositive4000208 - 400121236412.4
hypothetical proteinCFE38_18630Not AvailablePositive4001276 - 400358283522.5
yggs family pyridoxal phosphate-dependent enzymeCFE38_18635Not AvailableNegative4003613 - 400429924605.7
oxidoreductaseCFE38_18640Not AvailablePositive4004444 - 400534931450.7
transporterCFE38_18645Not AvailableNegative4005431 - 400605122193.8
phosphoheptose isomeraseCFE38_18650Not AvailableNegative4006052 - 400663620543.9
yran family proteinCFE38_18655Not AvailableNegative4006713 - 400710214130.8
16s rrna (cytidine(1402)-2'-o)-methyltransferaseCFE38_18660Not AvailablePositive4007117 - 400801631536.8

Displaying genes 3661 – 3670 of 4212 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.