Comamonadaceae bacterium PBBC1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Description

Comamonadaceae bacterium PBBC1 is characterized by its single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. The organism is cataloged under the accession number NKIP00000000.1, which serves as a reference for its genomic data. As a member of the Comamonadaceae family, this bacterium is likely to exhibit traits common to its relatives, such as the ability to degrade various organic compounds, which can be beneficial in bioremediation processes. The single replicon suggests that Comamonadaceae bacterium PBBC1 may have a simpler regulatory framework compared to organisms with multiple replicons, potentially allowing for rapid responses to environmental changes. In ecological contexts, the presence of Comamonadaceae bacterium PBBC1 in microbial communities may play a significant role in nutrient cycling and organic matter degradation. Its adaptability and metabolic capabilities could enhance its survival in diverse habitats, contributing to the overall health and functionality of ecosystems where it is present. Understanding its specific functions and interactions within microbial communities could provide valuable insights into the ecological roles of Comamonadaceae members in natural and engineered environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Comamonadaceae bacterium PBBC1 NODE_20223, whole genome

Gene Summary

Adenine Count

956467 bp

Thymine Count

934823 bp

Guanine Count

1332877 bp

Cytosine Count

1363750 bp

Genome Length

4589522 bp

Protein-coding Genes

4163 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-dehydroquinate synthaseCFE38_17595Not AvailableNegative3773636 - 377474839297.6
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseCFE38_17600Not AvailableNegative3774888 - 377575131136.9
3-oxoacyl-acp reductaseCFE38_17605Not AvailableNegative3775778 - 377653626613.9
nad(p)-dependent oxidoreductaseCFE38_17610Not AvailableNegative3776696 - 377744526406.8
mandelate racemaseCFE38_17615Not AvailableNegative3777442 - 377855740481.6
gntr family transcriptional regulatorCFE38_17620Not AvailablePositive3778808 - 377953326691.8
abc transporter substrate-binding proteinCFE38_17625Not AvailablePositive3779613 - 378060836537.9
trap transporter permease dctqCFE38_17630Not AvailablePositive3780780 - 378135521601.3
abc transporter permeaseCFE38_17635Not AvailablePositive3781377 - 378277149742.3
galactonate dehydrataseCFE38_17640Not AvailablePositive3782781 - 378430753983.1

Displaying genes 3461 – 3470 of 4212 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.