Comamonadaceae bacterium PBBC1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Description

Comamonadaceae bacterium PBBC1 is characterized by its single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. The organism is cataloged under the accession number NKIP00000000.1, which serves as a reference for its genomic data. As a member of the Comamonadaceae family, this bacterium is likely to exhibit traits common to its relatives, such as the ability to degrade various organic compounds, which can be beneficial in bioremediation processes. The single replicon suggests that Comamonadaceae bacterium PBBC1 may have a simpler regulatory framework compared to organisms with multiple replicons, potentially allowing for rapid responses to environmental changes. In ecological contexts, the presence of Comamonadaceae bacterium PBBC1 in microbial communities may play a significant role in nutrient cycling and organic matter degradation. Its adaptability and metabolic capabilities could enhance its survival in diverse habitats, contributing to the overall health and functionality of ecosystems where it is present. Understanding its specific functions and interactions within microbial communities could provide valuable insights into the ecological roles of Comamonadaceae members in natural and engineered environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Comamonadaceae bacterium PBBC1 NODE_20223, whole genome

Gene Summary

Adenine Count

956467 bp

Thymine Count

934823 bp

Guanine Count

1332877 bp

Cytosine Count

1363750 bp

Genome Length

4589522 bp

Protein-coding Genes

4163 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thiol reductase thioredoxinCFE38_15605Not AvailablePositive3369145 - 336959116257.4
multifunctional cca trna nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphataseCFE38_15610Not AvailableNegative3369685 - 337093545838.4
glutathione s-transferaseCFE38_15615Not AvailableNegative3370950 - 337163325398.7
nad-dependent dehydrataseCFE38_15620Not AvailableNegative3371795 - 337275434260.6
hypothetical proteinCFE38_15625Not AvailableNegative3372751 - 337383639516.5
amidohydrolaseCFE38_15630Not AvailableNegative3373850 - 337506143400.8
molybdopterin oxidoreductaseCFE38_15635Not AvailablePositive3375539 - 337762375607.8
hypothetical proteinCFE38_15640Not AvailablePositive3377651 - 337795311104.2
lytic transglycosylaseCFE38_15645Not AvailableNegative3378281 - 338026374410.9
5-formyltetrahydrofolate cyclo-ligaseCFE38_15650Not AvailablePositive3380285 - 338086922044.5

Displaying genes 3071 – 3080 of 4212 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.