Comamonadaceae bacterium PBBC1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Description

Comamonadaceae bacterium PBBC1 is characterized by its single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. The organism is cataloged under the accession number NKIP00000000.1, which serves as a reference for its genomic data. As a member of the Comamonadaceae family, this bacterium is likely to exhibit traits common to its relatives, such as the ability to degrade various organic compounds, which can be beneficial in bioremediation processes. The single replicon suggests that Comamonadaceae bacterium PBBC1 may have a simpler regulatory framework compared to organisms with multiple replicons, potentially allowing for rapid responses to environmental changes. In ecological contexts, the presence of Comamonadaceae bacterium PBBC1 in microbial communities may play a significant role in nutrient cycling and organic matter degradation. Its adaptability and metabolic capabilities could enhance its survival in diverse habitats, contributing to the overall health and functionality of ecosystems where it is present. Understanding its specific functions and interactions within microbial communities could provide valuable insights into the ecological roles of Comamonadaceae members in natural and engineered environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Comamonadaceae bacterium PBBC1 NODE_20223, whole genome

Gene Summary

Adenine Count

956467 bp

Thymine Count

934823 bp

Guanine Count

1332877 bp

Cytosine Count

1363750 bp

Genome Length

4589522 bp

Protein-coding Genes

4163 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phenylacetate-coa oxygenase subunit paaiCFE38_15455Not AvailableNegative3346651 - 334746329764.0
1,2-phenylacetyl-coa epoxidase subunit bCFE38_15460Not AvailableNegative3347509 - 334780511167.0
1,2-phenylacetyl-coa epoxidase subunit aCFE38_15465Not AvailableNegative3347802 - 334883338311.5
23s rrna (adenine(2030)-n(6))-methyltransferase rlmjCFE38_15470Not AvailableNegative3348992 - 334987932562.2
50s ribosomal protein l13CFE38_15475Not AvailablePositive3350077 - 335050815694.2
30s ribosomal protein s9CFE38_15480Not AvailablePositive3350520 - 335091214402.5
iron-sulfur cluster insertion protein erpaCFE38_15485Not AvailablePositive3351081 - 335144612968.1
anhydro-n-acetylmuramic acid kinaseCFE38_15490Not AvailableNegative3351480 - 335261640374.5
peptidase m23CFE38_15495Not AvailableNegative3352692 - 335415853113.7
tyrosine--trna ligaseCFE38_15500Not AvailablePositive3354300 - 335553244873.3

Displaying genes 3041 – 3050 of 4212 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.