Sphingomonadaceae bacterium PASS1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Description

Sphingomonadaceae bacterium PASS1 is a member of the Sphingomonadaceae family, characterized by having a single replicon. The genomic data for this bacterium is accessible under the accession number NKIR00000000.1. The Sphingomonadaceae family is known for its ecological versatility and ability to degrade a variety of environmental pollutants, which suggests that Sphingomonadaceae bacterium PASS1 may possess similar metabolic capabilities. These traits make members of this family significant in bioremediation efforts, as they can potentially contribute to the breakdown of complex organic compounds in contaminated environments. Understanding the traits of Sphingomonadaceae bacterium PASS1 can provide insights into its ecological role and potential applications in environmental microbiology. The single replicon structure indicates a streamlined genome, which may facilitate efficient replication and adaptation to diverse habitats. As researchers continue to study such bacteria, the specific metabolic pathways and interactions within ecosystems can be further elucidated, highlighting the importance of Sphingomonadaceae in ecological balance and bioremediation processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Sphingomonadaceae bacterium PASS1 NODE_13070, whole genome

Gene Summary

Adenine Count

686419 bp

Thymine Count

680345 bp

Guanine Count

849529 bp

Cytosine Count

856564 bp

Genome Length

3072882 bp

Protein-coding Genes

2834 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pectate lyaseCFE36_04875Not AvailablePositive1047393 - 104874548765.4
cupinCFE36_04880Not AvailablePositive1048756 - 104914213958.2
carboxylesteraseCFE36_04885Not AvailableNegative1049149 - 105054050387.2
2-keto-3-deoxygluconate kinaseCFE36_04890Not AvailableNegative1050575 - 105158535250.0
2-deoxy-d-gluconate 3-dehydrogenaseCFE36_04895Not AvailableNegative1051595 - 105235026020.9
hypothetical proteinCFE36_04900Not AvailableNegative1052352 - 105299022751.2
laci family transcriptional regulatorCFE36_04905Not AvailableNegative1053075 - 105412738204.1
2-keto-4-pentenoate hydrataseCFE36_04910Not AvailablePositive1054280 - 105506827385.4
mfs transporterCFE36_04915Not AvailablePositive1055092 - 105636946795.7
galactonate dehydrataseCFE36_04920Not AvailablePositive1056373 - 105785450837.4

Displaying genes 971 – 980 of 2877 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.