Sphingomonadaceae bacterium PASS1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Description

Sphingomonadaceae bacterium PASS1 is a member of the Sphingomonadaceae family, characterized by having a single replicon. The genomic data for this bacterium is accessible under the accession number NKIR00000000.1. The Sphingomonadaceae family is known for its ecological versatility and ability to degrade a variety of environmental pollutants, which suggests that Sphingomonadaceae bacterium PASS1 may possess similar metabolic capabilities. These traits make members of this family significant in bioremediation efforts, as they can potentially contribute to the breakdown of complex organic compounds in contaminated environments. Understanding the traits of Sphingomonadaceae bacterium PASS1 can provide insights into its ecological role and potential applications in environmental microbiology. The single replicon structure indicates a streamlined genome, which may facilitate efficient replication and adaptation to diverse habitats. As researchers continue to study such bacteria, the specific metabolic pathways and interactions within ecosystems can be further elucidated, highlighting the importance of Sphingomonadaceae in ecological balance and bioremediation processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Sphingomonadaceae bacterium PASS1 NODE_13070, whole genome

Gene Summary

Adenine Count

686419 bp

Thymine Count

680345 bp

Guanine Count

849529 bp

Cytosine Count

856564 bp

Genome Length

3072882 bp

Protein-coding Genes

2834 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCFE36_14365Not AvailableNegative3037650 - 303809916535.1
ethyl tert-butyl ether degradation protein ethdCFE36_14370Not AvailableNegative3039090 - 303938911021.5
phenylacetate--coa ligaseCFE36_14375Not AvailableNegative3039408 - 304069446489.7
phenylacetic acid degradation bifunctional protein paazCFE36_14380Not AvailableNegative3040696 - 304272371990.9
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomeraseCFE36_14385Not AvailableNegative3042739 - 304352727928.6
3-oxoadipyl-coa thiolaseCFE36_14390Not AvailablePositive3043630 - 304483241903.8
1,2-phenylacetyl-coa epoxidase subunit aCFE36_14395Not AvailablePositive3044889 - 304587536922.7
1,2-phenylacetyl-coa epoxidase subunit bCFE36_14400Not AvailablePositive3045878 - 304616210737.6
phenylacetate-coa oxygenase subunit paaiCFE36_14405Not AvailablePositive3046162 - 304691428154.4
phenylacetate-coa oxygenase subunit paajCFE36_14410Not AvailablePositive3046880 - 304736217728.2

Displaying genes 2841 – 2850 of 2877 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.