Sphingomonadaceae bacterium PASS1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Description

Sphingomonadaceae bacterium PASS1 is a member of the Sphingomonadaceae family, characterized by having a single replicon. The genomic data for this bacterium is accessible under the accession number NKIR00000000.1. The Sphingomonadaceae family is known for its ecological versatility and ability to degrade a variety of environmental pollutants, which suggests that Sphingomonadaceae bacterium PASS1 may possess similar metabolic capabilities. These traits make members of this family significant in bioremediation efforts, as they can potentially contribute to the breakdown of complex organic compounds in contaminated environments. Understanding the traits of Sphingomonadaceae bacterium PASS1 can provide insights into its ecological role and potential applications in environmental microbiology. The single replicon structure indicates a streamlined genome, which may facilitate efficient replication and adaptation to diverse habitats. As researchers continue to study such bacteria, the specific metabolic pathways and interactions within ecosystems can be further elucidated, highlighting the importance of Sphingomonadaceae in ecological balance and bioremediation processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Sphingomonadaceae bacterium PASS1 NODE_13070, whole genome

Gene Summary

Adenine Count

686419 bp

Thymine Count

680345 bp

Guanine Count

849529 bp

Cytosine Count

856564 bp

Genome Length

3072882 bp

Protein-coding Genes

2834 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cystathionine beta-lyaseCFE36_13250Not AvailableNegative2811079 - 281230544388.8
3-mercaptopyruvate sulfurtransferaseCFE36_13255Not AvailableNegative2812260 - 281310230198.4
cryptochrome/photolyase family proteinCFE36_13260Not AvailableNegative2813165 - 281468857543.6
nadph-dependent 7-cyano-7-deazaguanine reductase quefCFE36_13265Not AvailablePositive2814853 - 281531117092.4
atp-binding proteinCFE36_13270Not AvailableNegative2815314 - 281687655835.0
serine hydrolaseCFE36_13275Not AvailablePositive2817089 - 281820439766.2
hypothetical proteinCFE36_13280Not AvailableNegative2818333 - 28185727193.17
arsr family transcriptional regulatorCFE36_13285Not AvailablePositive2818803 - 281978336351.9
methylenetetrahydrofolate reductaseCFE36_13290Not AvailablePositive2819780 - 282072133859.3
5-methyltetrahydrofolate--homocysteine methyltransferaseCFE36_13295Not AvailablePositive2820718 - 282176437064.2

Displaying genes 2621 – 2630 of 2877 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.