Sphingomonadaceae bacterium PASS1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Description

Sphingomonadaceae bacterium PASS1 is a member of the Sphingomonadaceae family, characterized by having a single replicon. The genomic data for this bacterium is accessible under the accession number NKIR00000000.1. The Sphingomonadaceae family is known for its ecological versatility and ability to degrade a variety of environmental pollutants, which suggests that Sphingomonadaceae bacterium PASS1 may possess similar metabolic capabilities. These traits make members of this family significant in bioremediation efforts, as they can potentially contribute to the breakdown of complex organic compounds in contaminated environments. Understanding the traits of Sphingomonadaceae bacterium PASS1 can provide insights into its ecological role and potential applications in environmental microbiology. The single replicon structure indicates a streamlined genome, which may facilitate efficient replication and adaptation to diverse habitats. As researchers continue to study such bacteria, the specific metabolic pathways and interactions within ecosystems can be further elucidated, highlighting the importance of Sphingomonadaceae in ecological balance and bioremediation processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Sphingomonadaceae bacterium PASS1 NODE_13070, whole genome

Gene Summary

Adenine Count

686419 bp

Thymine Count

680345 bp

Guanine Count

849529 bp

Cytosine Count

856564 bp

Genome Length

3072882 bp

Protein-coding Genes

2834 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tigr02281 family clan aa aspartic proteaseCFE36_11675Not AvailableNegative2493046 - 249364821928.3
luxr family transcriptional regulatorCFE36_11680Not AvailableNegative2493645 - 249442128358.4
methionine--trna ligaseCFE36_11685Not AvailableNegative2494421 - 249598958541.3
dna polymerase iii subunit delta'CFE36_11690Not AvailableNegative2496014 - 249697334491.1
dtmp kinaseCFE36_11695Not AvailableNegative2496973 - 249761122816.0
hypothetical proteinCFE36_11700Not AvailableNegative2497608 - 24978478575.49
lytic transglycosylaseCFE36_11705Not AvailableNegative2497925 - 249903741093.9
Trna-serNot AvailableNot AvailablePositive2499162 - 2499251Not Available
dna repair nucleotidyltransferaseCFE36_11715Not AvailableNegative2499527 - 250079846598.9
dna polymerase vCFE36_11720Not AvailableNegative2500798 - 250121715336.5

Displaying genes 2311 – 2320 of 2877 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.