Novosphingobium sp. PASSN1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PASSN1 is a bacterial strain characterized by the presence of flagella, which suggests potential motility in its ecological niche. The strain possesses a single replicon, indicating a streamlined genomic organization typical of many bacteria. The genomic data for Novosphingobium sp. PASSN1 is cataloged under the accession number NKIS00000000.1, facilitating further research and identification. The presence of flagella may enhance the strain's ability to navigate its environment, potentially allowing it to exploit various ecological niches or sources of nutrients more effectively. This motility could play a crucial role in its survival and adaptation, especially in heterogeneous environments where the availability of resources may fluctuate. In summary, the traits of Novosphingobium sp. PASSN1 highlight its motility and genomic simplicity, which could confer advantages in diverse ecosystems. Understanding these characteristics can provide insights into the ecological roles of Novosphingobium species and their potential applications in environmental bioremediation or biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PASSN1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Novosphingobium sp. PASSN1 NODE_20119, whole genome shotgun

Gene Summary

Adenine Count

878908 bp

Thymine Count

871488 bp

Guanine Count

1561310 bp

Cytosine Count

1584958 bp

Genome Length

4897651 bp

Protein-coding Genes

4327 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
isncy family transposaseCFE35_02595Not AvailableNegative579862 - 58110347058.9
mbl fold metallo-hydrolaseCFE35_02600Not AvailableNegative581429 - 58219627963.4
luxr family transcriptional regulatorCFE35_02605Not AvailableNegative582193 - 58296928076.1
methionine--trna ligaseCFE35_02610Not AvailableNegative582969 - 58453158411.2
dna polymerase iii subunit delta'CFE35_02615Not AvailableNegative584578 - 58553433915.0
dtmp kinaseCFE35_02620Not AvailableNegative585540 - 58616021454.6
d-alanyl-d-alanine carboxypeptidaseCFE35_02625Not AvailableNegative586157 - 58723038319.3
sporulation protein ssgaCFE35_02630Not AvailableNegative587378 - 58841835360.8
lytic transglycosylaseCFE35_02635Not AvailableNegative588402 - 58943636908.8
Trna-serNot AvailableNot AvailablePositive589604 - 589693Not Available

Displaying genes 521 – 530 of 4378 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.