Novosphingobium sp. PASSN1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PASSN1 is a bacterial strain characterized by the presence of flagella, which suggests potential motility in its ecological niche. The strain possesses a single replicon, indicating a streamlined genomic organization typical of many bacteria. The genomic data for Novosphingobium sp. PASSN1 is cataloged under the accession number NKIS00000000.1, facilitating further research and identification. The presence of flagella may enhance the strain's ability to navigate its environment, potentially allowing it to exploit various ecological niches or sources of nutrients more effectively. This motility could play a crucial role in its survival and adaptation, especially in heterogeneous environments where the availability of resources may fluctuate. In summary, the traits of Novosphingobium sp. PASSN1 highlight its motility and genomic simplicity, which could confer advantages in diverse ecosystems. Understanding these characteristics can provide insights into the ecological roles of Novosphingobium species and their potential applications in environmental bioremediation or biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PASSN1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Novosphingobium sp. PASSN1 NODE_20119, whole genome shotgun

Gene Summary

Adenine Count

878908 bp

Thymine Count

871488 bp

Guanine Count

1561310 bp

Cytosine Count

1584958 bp

Genome Length

4897651 bp

Protein-coding Genes

4327 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
disulfide bond formation protein dsbcCFE35_15485Not AvailableNegative3471344 - 347213527603.8
conjugal transfer protein trabCFE35_15490Not AvailableNegative3472190 - 347353346996.8
conjugal transfer protein trakCFE35_15495Not AvailableNegative3473530 - 347433027992.4
conjugal transfer protein traeCFE35_15500Not AvailableNegative3474360 - 347492320538.9
type iv conjugative transfer system protein tralCFE35_15505Not AvailableNegative3474927 - 347521110883.6
hypothetical proteinCFE35_15510Not AvailableNegative3475296 - 347561610244.5
hypothetical proteinCFE35_15515Not AvailablePositive3475909 - 347629514163.0
hypothetical proteinCFE35_15520Not AvailablePositive3476539 - 347688913119.9
lytic transglycosylaseCFE35_15525Not AvailableNegative3476935 - 347734214728.8
aaa family atpaseCFE35_15530Not AvailablePositive3478330 - 347936137862.4

Displaying genes 3061 – 3070 of 4378 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.