Novosphingobium sp. PASSN1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PASSN1 is a bacterial strain characterized by the presence of flagella, which suggests potential motility in its ecological niche. The strain possesses a single replicon, indicating a streamlined genomic organization typical of many bacteria. The genomic data for Novosphingobium sp. PASSN1 is cataloged under the accession number NKIS00000000.1, facilitating further research and identification. The presence of flagella may enhance the strain's ability to navigate its environment, potentially allowing it to exploit various ecological niches or sources of nutrients more effectively. This motility could play a crucial role in its survival and adaptation, especially in heterogeneous environments where the availability of resources may fluctuate. In summary, the traits of Novosphingobium sp. PASSN1 highlight its motility and genomic simplicity, which could confer advantages in diverse ecosystems. Understanding these characteristics can provide insights into the ecological roles of Novosphingobium species and their potential applications in environmental bioremediation or biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PASSN1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Novosphingobium sp. PASSN1 NODE_20119, whole genome shotgun

Gene Summary

Adenine Count

878908 bp

Thymine Count

871488 bp

Guanine Count

1561310 bp

Cytosine Count

1584958 bp

Genome Length

4897651 bp

Protein-coding Genes

4327 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chromosome partitioning protein paraCFE35_12395Not AvailableNegative2785163 - 278589125599.9
hypothetical proteinCFE35_12400Not AvailablePositive2786202 - 278735338889.6
hypothetical proteinCFE35_12405Not AvailablePositive2787370 - 278859343760.9
tigr02281 family clan aa aspartic proteaseCFE35_12410Not AvailableNegative2788550 - 278926625092.4
l,d-transpeptidaseCFE35_12415Not AvailablePositive2789476 - 279015623419.1
hypothetical proteinCFE35_12420Not AvailablePositive2790223 - 279091523022.2
lysine transporter lyseCFE35_12425Not AvailablePositive2790988 - 279152418237.9
3-hydroxy-2-methylbutyryl-coa dehydrogenaseCFE35_12430Not AvailableNegative2791659 - 279244427149.9
hypothetical proteinCFE35_12435Not AvailablePositive2792635 - 279309317224.6
rna polymerase subunit sigmaCFE35_12440Not AvailableNegative2793215 - 279386523361.8

Displaying genes 2461 – 2470 of 4378 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.