Herbaspirillum robiniae str. HZ10

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Herbaspirillum

Description

Herbaspirillum robiniae str. HZ10 is a Gram-negative bacterium characterized by the presence of flagella, which suggest motility and potential environmental adaptability. This strain has a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in various ecological niches. The genomic data for this strain is accessible under the accession number NJGU00000000.1. As a member of the genus Herbaspirillum, this bacterium is likely involved in plant-associated interactions, which may include promoting plant growth or influencing soil nutrient dynamics. Given its motility, H. robiniae str. HZ10 may effectively colonize plant roots or other substrates, enhancing its role in the rhizosphere. Such interactions are crucial for nutrient cycling and can have significant implications for plant health and agricultural productivity. Overall, the traits of Herbaspirillum robiniae str. HZ10 highlight its potential ecological role, particularly in promoting beneficial plant-microbe interactions. Understanding the behavior and characteristics of this strain could provide insights into its applications in sustainable agriculture and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusHerbaspirillum
SpeciesHerbaspirillum robiniae
StrainHZ10

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Herbaspirillum robiniae str. HZ10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Herbaspirillum robiniae strain HZ10 Scaffold26_1, whole genome

Gene Summary

Adenine Count

974280 bp

Thymine Count

970561 bp

Guanine Count

1786735 bp

Cytosine Count

1802980 bp

Genome Length

5534556 bp

Protein-coding Genes

4786 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc-f family atpaseCEJ42_01400Not AvailableNegative340643 - 34224459262.6
duf1439 domain-containing proteinCEJ42_01405Not AvailablePositive342489 - 34304920544.6
muramoyltetrapeptide carboxypeptidaseCEJ42_01410Not AvailableNegative343096 - 34411836328.4
trna adenosine(34) deaminase tadaCEJ42_01415Not AvailableNegative344115 - 34470521081.2
6-carboxytetrahydropterin synthase quedCEJ42_01420Not AvailableNegative344712 - 34515816708.0
7-carboxy-7-deazaguanine synthaseCEJ42_01425Not AvailableNegative345262 - 34589723294.9
tetr family transcriptional regulatorCEJ42_01430Not AvailablePositive346221 - 34679320716.9
short-chain dehydrogenase/reductaseCEJ42_01435Not AvailablePositive346965 - 34782831142.3
epimeraseCEJ42_01440Not AvailablePositive347891 - 34861025942.8
hypothetical proteinCEJ42_01445Not AvailableNegative348683 - 34930922227.2

Displaying genes 281 – 290 of 4844 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.