Vibrio tarriae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio tarriae is a bacterial species characterized by having a single replicon, indicating a streamlined genomic structure. The complete genome of Vibrio tarriae is available under the accession number QKKN00000000.1. This single-replicon configuration may suggest a specific adaptation to its ecological niche, potentially influencing its replication and survival strategies in various environments. The taxonomy of Vibrio tarriae places it within the Vibrionaceae family, which is known for its members that are often associated with marine environments and can exhibit diverse metabolic capabilities. While specific ecological roles of Vibrio tarriae are not detailed in the provided traits, members of the Vibrio genus are typically noted for their interactions with aquatic organisms and their roles in nutrient cycling within marine ecosystems. The presence of Vibrio species in marine environments often correlates with their ability to thrive in fluctuating conditions. This adaptability may offer insights into the ecological dynamics of Vibrio tarriae, particularly its potential interactions with marine life and the surrounding environment. Understanding its genomic features, especially the presence of a single replicon, could provide further clarity on its evolutionary strategies and ecological roles within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio tarriae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio tarriae
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio tarriae strain 2017 V-1124 2017V_1124_contig80, whole

Gene Summary

Adenine Count

1094456 bp

Thymine Count

1092949 bp

Guanine Count

969149 bp

Cytosine Count

981207 bp

Genome Length

4137761 bp

Protein-coding Genes

3723 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma-54-dependent fis family transcriptional regulatorDLR65_04675Not AvailablePositive1014438 - 101620165473.8
dna-binding protein vf530DLR65_04680Not AvailablePositive1016298 - 10165138216.88
nyn domain-containing proteinDLR65_04685Not AvailablePositive1016625 - 101709817951.4
duf2986 domain-containing proteinDLR65_04690Not AvailableNegative1017090 - 10172937657.04
n-acetylmannosamine kinaseDLR65_04700Not AvailableNegative1017890 - 101875330612.1
n-acetylmannosamine-6-phosphate 2-epimeraseDLR65_04705Not AvailableNegative1018741 - 101946325545.5
sialic acid-binding proteinDLR65_04715Not AvailablePositive1019677 - 102064236170.5
trap transporter small permeaseDLR65_04720Not AvailablePositive1020692 - 102121319398.3
trap transporter large permeaseDLR65_04725Not AvailablePositive1021222 - 102250545487.7
n-acetylneuraminate lyaseDLR65_04730Not AvailablePositive1022544 - 102344032093.7

Displaying genes 971 – 980 of 3818 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.