Vibrio tarriae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio tarriae is a bacterial species characterized by having a single replicon, indicating a streamlined genomic structure. The complete genome of Vibrio tarriae is available under the accession number QKKN00000000.1. This single-replicon configuration may suggest a specific adaptation to its ecological niche, potentially influencing its replication and survival strategies in various environments. The taxonomy of Vibrio tarriae places it within the Vibrionaceae family, which is known for its members that are often associated with marine environments and can exhibit diverse metabolic capabilities. While specific ecological roles of Vibrio tarriae are not detailed in the provided traits, members of the Vibrio genus are typically noted for their interactions with aquatic organisms and their roles in nutrient cycling within marine ecosystems. The presence of Vibrio species in marine environments often correlates with their ability to thrive in fluctuating conditions. This adaptability may offer insights into the ecological dynamics of Vibrio tarriae, particularly its potential interactions with marine life and the surrounding environment. Understanding its genomic features, especially the presence of a single replicon, could provide further clarity on its evolutionary strategies and ecological roles within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio tarriae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio tarriae
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio tarriae strain 2017 V-1124 2017V_1124_contig80, whole

Gene Summary

Adenine Count

1094456 bp

Thymine Count

1092949 bp

Guanine Count

969149 bp

Cytosine Count

981207 bp

Genome Length

4137761 bp

Protein-coding Genes

3723 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
single-stranded-dna-specific exonuclease recjDLR65_09475Not AvailableNegative2069082 - 207082164276.1
bifunctional protein-disulfide isomerase/oxidoreductase dsbcDLR65_09480Not AvailableNegative2070880 - 207163227396.1
site-specific tyrosine recombinase xerdDLR65_09485Not AvailableNegative2071649 - 207255734567.7
flavodoxin fldbDLR65_09490Not AvailablePositive2072695 - 207321319424.8
1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampdDLR65_09495Not AvailableNegative2073277 - 207382820784.9
carboxylating nicotinate-nucleotide diphosphorylaseDLR65_09500Not AvailablePositive2073999 - 207488932053.5
pilus assembly protein pilaDLR65_09505Not AvailablePositive2075133 - 207555814756.7
type iv-a pilus assembly atpase pilbDLR65_09510Not AvailablePositive2075565 - 207725361815.5
type ii secretion system f family proteinDLR65_09515Not AvailablePositive2077307 - 207853345129.3
prepilin peptidaseDLR65_09520Not AvailablePositive2078591 - 207946632520.8

Displaying genes 1911 – 1920 of 3818 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.