Vibrio tarriae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio tarriae is a bacterial species characterized by having a single replicon, indicating a streamlined genomic structure. The complete genome of Vibrio tarriae is available under the accession number QKKN00000000.1. This single-replicon configuration may suggest a specific adaptation to its ecological niche, potentially influencing its replication and survival strategies in various environments. The taxonomy of Vibrio tarriae places it within the Vibrionaceae family, which is known for its members that are often associated with marine environments and can exhibit diverse metabolic capabilities. While specific ecological roles of Vibrio tarriae are not detailed in the provided traits, members of the Vibrio genus are typically noted for their interactions with aquatic organisms and their roles in nutrient cycling within marine ecosystems. The presence of Vibrio species in marine environments often correlates with their ability to thrive in fluctuating conditions. This adaptability may offer insights into the ecological dynamics of Vibrio tarriae, particularly its potential interactions with marine life and the surrounding environment. Understanding its genomic features, especially the presence of a single replicon, could provide further clarity on its evolutionary strategies and ecological roles within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio tarriae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio tarriae
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio tarriae strain 2017 V-1124 2017V_1124_contig80, whole

Gene Summary

Adenine Count

1094456 bp

Thymine Count

1092949 bp

Guanine Count

969149 bp

Cytosine Count

981207 bp

Genome Length

4137761 bp

Protein-coding Genes

3723 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseDLR65_09420Not AvailableNegative2055020 - 205638147978.4
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseDLR65_09425Not AvailableNegative2056378 - 205791655636.6
penicillin-binding protein 3DLR65_09430Not AvailableNegative2057882 - 205962463353.5
cell division protein ftslDLR65_09435Not AvailableNegative2059621 - 205994112174.1
16s rrna (cytosine(1402)-n(4))-methyltransferaseDLR65_09440Not AvailableNegative2059951 - 206090135128.0
dihydrolipoyl dehydrogenaseDLR65_09450Not AvailableNegative2061659 - 206308651012.0
pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferaseDLR65_09455Not AvailableNegative2063354 - 206522264948.3
pyruvate dehydrogenase (acetyl-transferring), homodimeric typeDLR65_09460Not AvailableNegative2065223 - 206788399099.0
pyruvate dehydrogenase complex transcriptional repressor pdhrDLR65_09465Not AvailableNegative2067933 - 206870329371.2
hypothetical proteinDLR65_09470Not AvailableNegative2068657 - 20688457212.71

Displaying genes 1901 – 1910 of 3818 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.