Pseudomonas laurylsulfatiphila str. AP3_16

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas laurylsulfatiphila str. AP3_16 is characterized by a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptability in its environment. The organism is cataloged under the accession number NIRS00000000.1, which provides a reference for its genomic data. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse environments, often exhibiting traits such as resistance to various pollutants and the capacity to degrade complex organic compounds. While specific metabolic pathways for Pseudomonas laurylsulfatiphila str. AP3_16 are not detailed here, the genus is generally recognized for its ecological role in bioremediation. The presence of only one replicon in Pseudomonas laurylsulfatiphila str. AP3_16 may suggest an evolutionary adaptation that enhances its survival and proliferation in specific niches, potentially including environments rich in surfactants or other organic materials, as implied by its name. In summary, Pseudomonas laurylsulfatiphila str. AP3_16, with its single replicon and classification, may contribute to ecological processes such as the degradation of surfactants in contaminated environments, underscoring the importance of this organism in microbial ecology and potential applications in bioremediation strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas laurylsulfatiphila
StrainAP3_16

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas laurylsulfatiphila str. AP3_16
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas laurylsulfatiphila strain AP3_16 contig13, whole

Gene Summary

Adenine Count

1353515 bp

Thymine Count

1310611 bp

Guanine Count

1963697 bp

Cytosine Count

2056821 bp

Genome Length

6684644 bp

Protein-coding Genes

5839 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acetyltransferaseCD175_00020Not AvailableNegative3250 - 422435370.8
short-chain dehydrogenaseCD175_00025Not AvailableNegative4237 - 502527501.2
sulfotransferaseCD175_00030Not AvailableNegative5063 - 623244721.6
hypothetical proteinCD175_00035Not AvailableNegative6229 - 734442098.4
srpbcc domain-containing proteinCD175_00040Not AvailablePositive7565 - 803517447.7
sulfate adenylyltransferase small subunitCD175_00045Not AvailablePositive8149 - 904534485.5
adenylyl-sulfate kinaseCD175_00050Not AvailablePositive9045 - 1093769610.2
helix-turn-helix transcriptional regulatorCD175_00055Not AvailablePositive11090 - 1226243598.5
5s ribosomal rnaNot AvailableNot AvailablePositive14053 - 14168Not Available
amidohydrolaseCD175_00060Not AvailableNegative12936 - 1441154016.9

Displaying genes 61 – 70 of 5950 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.