Pseudomonas laurylsulfatiphila str. AP3_16

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas laurylsulfatiphila str. AP3_16 is characterized by a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptability in its environment. The organism is cataloged under the accession number NIRS00000000.1, which provides a reference for its genomic data. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse environments, often exhibiting traits such as resistance to various pollutants and the capacity to degrade complex organic compounds. While specific metabolic pathways for Pseudomonas laurylsulfatiphila str. AP3_16 are not detailed here, the genus is generally recognized for its ecological role in bioremediation. The presence of only one replicon in Pseudomonas laurylsulfatiphila str. AP3_16 may suggest an evolutionary adaptation that enhances its survival and proliferation in specific niches, potentially including environments rich in surfactants or other organic materials, as implied by its name. In summary, Pseudomonas laurylsulfatiphila str. AP3_16, with its single replicon and classification, may contribute to ecological processes such as the degradation of surfactants in contaminated environments, underscoring the importance of this organism in microbial ecology and potential applications in bioremediation strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas laurylsulfatiphila
StrainAP3_16

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas laurylsulfatiphila str. AP3_16
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas laurylsulfatiphila strain AP3_16 contig13, whole

Gene Summary

Adenine Count

1353515 bp

Thymine Count

1310611 bp

Guanine Count

1963697 bp

Cytosine Count

2056821 bp

Genome Length

6684644 bp

Protein-coding Genes

5839 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-octaprenyl-4-hydroxybenzoate decarboxylaseCD175_19920Not AvailableNegative4411285 - 441275154611.1
transcription termination factor rhoCD175_19925Not AvailableNegative4412893 - 441415246957.1
thiol reductase thioredoxinCD175_19930Not AvailableNegative4414400 - 441472911763.2
fadr family transcriptional regulatorCD175_19935Not AvailableNegative4414851 - 441555825195.4
hypothetical proteinCD175_19940Not AvailableNegative4415602 - 44157906608.99
amino acid abc transporter substrate-binding proteinCD175_19945Not AvailablePositive4415815 - 441660028145.2
abc transporter permeaseCD175_19950Not AvailablePositive4416623 - 441729124467.5
amino acid abc transporter permeaseCD175_19955Not AvailablePositive4417288 - 441793823622.4
amino acid abc transporter atp-binding proteinCD175_19960Not AvailablePositive4417925 - 441866226832.8
exopolyphosphataseCD175_19965Not AvailablePositive4418904 - 442040656412.8

Displaying genes 3911 – 3920 of 5950 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.