Pseudomonas laurylsulfatiphila str. AP3_16

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas laurylsulfatiphila str. AP3_16 is characterized by a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptability in its environment. The organism is cataloged under the accession number NIRS00000000.1, which provides a reference for its genomic data. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse environments, often exhibiting traits such as resistance to various pollutants and the capacity to degrade complex organic compounds. While specific metabolic pathways for Pseudomonas laurylsulfatiphila str. AP3_16 are not detailed here, the genus is generally recognized for its ecological role in bioremediation. The presence of only one replicon in Pseudomonas laurylsulfatiphila str. AP3_16 may suggest an evolutionary adaptation that enhances its survival and proliferation in specific niches, potentially including environments rich in surfactants or other organic materials, as implied by its name. In summary, Pseudomonas laurylsulfatiphila str. AP3_16, with its single replicon and classification, may contribute to ecological processes such as the degradation of surfactants in contaminated environments, underscoring the importance of this organism in microbial ecology and potential applications in bioremediation strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas laurylsulfatiphila
StrainAP3_16

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas laurylsulfatiphila str. AP3_16
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas laurylsulfatiphila strain AP3_16 contig13, whole

Gene Summary

Adenine Count

1353515 bp

Thymine Count

1310611 bp

Guanine Count

1963697 bp

Cytosine Count

2056821 bp

Genome Length

6684644 bp

Protein-coding Genes

5839 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
topoisomerase iiCD175_12065Not AvailableNegative2715932 - 271622210710.4
n-succinylarginine dihydrolaseCD175_12070Not AvailableNegative2716284 - 271763048823.9
succinylglutamate-semialdehyde dehydrogenaseCD175_12075Not AvailableNegative2717768 - 271923451319.2
arginine n-succinyltransferaseCD175_12080Not AvailableNegative2719234 - 272025937319.6
arginine/ornithine succinyltransferase subunit alphaCD175_12085Not AvailableNegative2720347 - 272136637181.0
bifunctional succinylornithine transaminase/acetylornithine transaminaseCD175_12090Not AvailableNegative2721567 - 272278743290.8
hypothetical proteinCD175_12095Not AvailablePositive2723098 - 2728035185060.0
arac family transcriptional regulatorCD175_12100Not AvailableNegative2728043 - 272903536735.1
histidine/lysine/arginine/ornithine abc transporter atp-binding protein hispCD175_12105Not AvailableNegative2729283 - 273004728052.1
peptidase m14CD175_12110Not AvailableNegative2730075 - 273118740024.9

Displaying genes 2431 – 2440 of 5950 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.