Thermococcus sp. 5-4

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus sp. 5-4 is a Gram-negative archaeon known for its unique adaptations to extreme environments. Notably, it possesses flagella, which facilitate motility in its habitat. This feature is significant for its ecological interactions, potentially allowing it to navigate toward optimal conditions for growth and survival. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its efficient replication and adaptation mechanisms in extreme environments. The genomic data for Thermococcus sp. 5-4 is cataloged under the accession NZ_CP021848.1, providing a resource for further genetic analysis and exploration of its biological functions. In terms of ecological insight, the presence of flagella in Thermococcus sp. 5-4 may enhance its ability to thrive in thermophilic environments, where competition for resources can be intense. The motility afforded by flagella could be advantageous for locating nutrients or escaping unfavorable conditions, thereby influencing its role in microbial community dynamics within geothermal systems. Understanding these traits helps to elucidate the survival strategies of extremophiles like Thermococcus sp. 5-4 and their contributions to their ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus sp. 5-4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermococcus sp. 5-4 chromosome, complete genome.

Gene Summary

Adenine Count

408264 bp

Thymine Count

413725 bp

Guanine Count

516290 bp

Cytosine Count

516630 bp

Genome Length

1854909 bp

Protein-coding Genes

1977 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-gluNot AvailableNot AvailablePositive722412 - 722489Not Available
glycosyltransferase family 39 proteinCDI07_RS04040Not AvailableNegative722516 - 72413560434.3
trna (guanine(9)-/adenine(9)-n1)-methyltransferaseCDI07_RS04045Not AvailablePositive724254 - 72536642876.4
valine--trna ligaseCDI07_RS04050Not AvailableNegative725415 - 728087103537.0
class i sam-dependent methyltransferaseCDI07_RS04055Not AvailableNegative728289 - 72903529313.2
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeCDI07_RS04060Not AvailableNegative729067 - 73003536985.4
adenosylcobinamide-phosphate synthase cbibCDI07_RS04065Not AvailableNegative730020 - 73090432950.7
uracil-dna glycosylase family proteinCDI07_RS04070Not AvailableNegative730892 - 73163828605.4
hypothetical proteinCDI07_RS04075Not AvailablePositive731721 - 7319337987.68
alpha-ribazole phosphatase cobzCDI07_RS04080Not AvailablePositive731995 - 73241715853.5

Displaying genes 811 – 820 of 2029 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.