Thermococcus sp. 5-4

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus sp. 5-4 is a Gram-negative archaeon known for its unique adaptations to extreme environments. Notably, it possesses flagella, which facilitate motility in its habitat. This feature is significant for its ecological interactions, potentially allowing it to navigate toward optimal conditions for growth and survival. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its efficient replication and adaptation mechanisms in extreme environments. The genomic data for Thermococcus sp. 5-4 is cataloged under the accession NZ_CP021848.1, providing a resource for further genetic analysis and exploration of its biological functions. In terms of ecological insight, the presence of flagella in Thermococcus sp. 5-4 may enhance its ability to thrive in thermophilic environments, where competition for resources can be intense. The motility afforded by flagella could be advantageous for locating nutrients or escaping unfavorable conditions, thereby influencing its role in microbial community dynamics within geothermal systems. Understanding these traits helps to elucidate the survival strategies of extremophiles like Thermococcus sp. 5-4 and their contributions to their ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus sp. 5-4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermococcus sp. 5-4 chromosome, complete genome.

Gene Summary

Adenine Count

408264 bp

Thymine Count

413725 bp

Guanine Count

516290 bp

Cytosine Count

516630 bp

Genome Length

1854909 bp

Protein-coding Genes

1977 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4350 domain-containing proteinCDI07_RS03835Not AvailablePositive685261 - 68781994737.0
translation initiation factor if-2b subunit alphaCDI07_RS03840Not AvailableNegative687843 - 68867030632.9
molybdopterin-binding proteinCDI07_RS03845Not AvailableNegative688736 - 68949428605.7
phosphorylating glyceraldehyde-3-phosphate dehydrogenaseCDI07_RS03850Not AvailablePositive689652 - 69065636960.5
phzf family phenazine biosynthesis proteinCDI07_RS03855Not AvailablePositive690696 - 69153230495.8
duf167 domain-containing proteinCDI07_RS03860Not AvailableNegative691522 - 69180610882.6
duf402 domain-containing proteinCDI07_RS03865Not AvailableNegative691808 - 69230819676.7
glycine--trna ligaseCDI07_RS03870Not AvailableNegative692338 - 69405066350.8
alpha-amylase family glycosyl hydrolaseCDI07_RS03875Not AvailableNegative694151 - 69644285887.9
lsm family proteinCDI07_RS03880Not AvailablePositive696595 - 6968258436.43

Displaying genes 771 – 780 of 2029 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.