Thermococcus sp. 5-4

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus sp. 5-4 is a Gram-negative archaeon known for its unique adaptations to extreme environments. Notably, it possesses flagella, which facilitate motility in its habitat. This feature is significant for its ecological interactions, potentially allowing it to navigate toward optimal conditions for growth and survival. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its efficient replication and adaptation mechanisms in extreme environments. The genomic data for Thermococcus sp. 5-4 is cataloged under the accession NZ_CP021848.1, providing a resource for further genetic analysis and exploration of its biological functions. In terms of ecological insight, the presence of flagella in Thermococcus sp. 5-4 may enhance its ability to thrive in thermophilic environments, where competition for resources can be intense. The motility afforded by flagella could be advantageous for locating nutrients or escaping unfavorable conditions, thereby influencing its role in microbial community dynamics within geothermal systems. Understanding these traits helps to elucidate the survival strategies of extremophiles like Thermococcus sp. 5-4 and their contributions to their ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus sp. 5-4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermococcus sp. 5-4 chromosome, complete genome.

Gene Summary

Adenine Count

408264 bp

Thymine Count

413725 bp

Guanine Count

516290 bp

Cytosine Count

516630 bp

Genome Length

1854909 bp

Protein-coding Genes

1977 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crispr-associated protein cas5CDI07_RS02245Not AvailableNegative394690 - 39536125391.8
devr family crispr-associated autoregulatorCDI07_RS02250Not AvailableNegative395362 - 39631836348.9
hypothetical proteinCDI07_RS02255Not AvailableNegative396311 - 39664012522.2
hypothetical proteinCDI07_RS02260Not AvailableNegative396624 - 39767639587.8
crispr-associated helicase/endonuclease cas3CDI07_RS02265Not AvailableNegative397654 - 39993986638.1
crispr-associated endoribonuclease cas6CDI07_RS02270Not AvailableNegative399899 - 40065729061.4
transcriptional regulatorCDI07_RS02275Not AvailableNegative400791 - 40203847935.6
acetate--coa ligase family proteinCDI07_RS02280Not AvailableNegative402141 - 40283925657.6
duf4139 domain-containing proteinCDI07_RS02285Not AvailablePositive402994 - 40429848454.9
hypothetical proteinCDI07_RS02290Not AvailableNegative404295 - 4045288870.67

Displaying genes 451 – 460 of 2029 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.